RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MTG2Q9H4K7 406 aa7.46□□□□□ -1.22
IFT88-201ENST00000319980 IPPKQ9H8X2 491 aa7.46□□□□□ -1.22
IFT88-201ENST00000319980 BCAP29Q9UHQ4 241 aa7.46□□□□□ -1.22
IFT88-201ENST00000319980 ZMYM5Q9UJ78 669 aa7.46□□□□□ -1.22
IFT88-201ENST00000319980 TMCO1Q9UM00 188 aa7.46□□□□□ -1.22
IFT88-201ENST00000319980 PPIL1Q9Y3C6 166 aa7.46□□□□□ -1.22
IFT88-201ENST00000319980 CXorf51AA0A1B0GTR3 108 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 TTC34A8MYJ7 566 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ACOT8O14734 319 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ANGPT2O15123 496 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 XYLBO75191 536 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 BCAS2O75934 225 aaPredicted RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 POLR2EP19388 210 aaKnown RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 CAPN3P20807 821 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 NNMTP40261 264 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 SLC7A2P52569 658 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 POLR2LP62875 67 aaKnown RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 HSPA14Q0VDF9 509 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 GTF2H2Q13888 395 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ARHGEF7Q14155 803 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 TRIM25Q14258 630 aaKnown RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 PCBP2Q15366 365 aaKnown RBP eCLIP7.45□□□□□ -1.22
IFT88-201ENST00000319980 POM121L1PQ3SYA9 428 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 CMPK2Q5EBM0 449 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 GTF2H2CQ6P1K8 395 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 IL27RAQ6UWB1 636 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ZNF366Q8N895 744 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 OR4F6Q8NGB9 312 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 UCMAQ8WVF2 138 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 SKA2Q8WVK7 121 aaPredicted RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 SCAMP4Q969E2 229 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ASB9Q96DX5 294 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 TEX37Q96LM6 180 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ECSITQ9BQ95 431 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 NUSAP1Q9BXS6 441 aaKnown RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 ZDHHC3Q9NYG2 299 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 MAP10Q9P2G4 905 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 EPS15L1Q9UBC2 864 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 MBD1Q9UIS9 605 aaPredicted RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 NDUFAF1Q9Y375 327 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 MYOFQ9NZM1 2061 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 OR7A17O14581 309 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 TAPBPO15533 448 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 MTX2O75431 263 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 LEFTY1O75610 366 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ARHGEF15O94989 841 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 C1SP09871 688 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 VCLP18206 1134 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 SPINT3P49223 89 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 B4GALNT1Q00973 533 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 KLC1Q07866 573 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 GSTA3Q16772 222 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 GRAMD1BQ3KR37 738 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ARSIQ5FYB1 569 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 XKR7Q5GH72 579 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 OGFOD2Q6N063 350 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 PSRC1Q6PGN9 363 aaPredicted RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 Q6ZSR9 355 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 EFL1Q7Z2Z2 1120 aaKnown RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 PQLC1Q8N2U9 271 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 FNDC5Q8NAU1 212 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 VPS33AQ96AX1 596 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 SPATA16Q9BXB7 569 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 PFDN4Q9NQP4 134 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 BATF3Q9NR55 127 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ELOVL2Q9NXB9 296 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 WWOXQ9NZC7 414 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 PTBP2Q9UKA9 531 aaKnown RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 PSMD13Q9UNM6 376 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ERVW-1Q9UQF0 538 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 MRPS23Q9Y3D9 190 aaKnown RBP7.45□□□□□ -1.22
IFT88-201ENST00000319980 OARD1Q9Y530 152 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ANGPTL3Q9Y5C1 460 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 GPR45Q9Y5Y3 372 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 CHD9Q3L8U1 2897 aa7.45□□□□□ -1.22
IFT88-201ENST00000319980 ANKRD12Q6UB98 2062 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 GRXCR2A6NFK2 248 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 SYNCRIPO60506 623 aaKnown RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 OTCP00480 354 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 PRR35P0CG20 571 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 CEBPBP17676 345 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 AKT1P31749 480 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 CCR7P32248 378 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 HTR6P50406 440 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 PTPN5P54829 565 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 MAP7D1Q3KQU3 841 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 TTLL9Q3SXZ7 439 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 ATP6AP1LQ52LC2 224 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 PRSS36Q5K4E3 855 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 C6orf136Q5SQH8 315 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 CYP2R1Q6VVX0 501 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 MBOAT1Q6ZNC8 495 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 SPATA19Q7Z5L4 167 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 MILR1Q7Z6M3 343 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 AHI1Q8N157 1196 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 ZNF557Q8N988 423 aaPredicted RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 PDPRQ8NCN5 879 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 ST13P5Q8NFI4 369 aaPredicted RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 LRRC3BQ96PB8 259 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 HEPHQ9BQS7 1158 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms