RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CAPZBP47756 277 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 PPP1CAP62136 330 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 CXADRP78310 365 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 CDH17Q12864 832 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 GPR33Q49SQ1 333 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 CCDC38Q502W7 563 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 SERPINA9Q86WD7 417 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 JAMLQ86YT9 394 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 RASGEF1CQ8N431 466 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 JPH3Q8WXH2 748 aaPredicted RBP14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 ULK4Q96C45 1275 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 TTC25Q96NG3 672 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 RANBP9Q96S59 729 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 COPS8Q99627 209 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 DDA1Q9BW61 102 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 RAB6BQ9NRW1 208 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 SEMA5BQ9P283 1151 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 CRLS1Q9UJA2 301 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 PSMD13Q9UNM6 376 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 ZNF148Q9UQR1 794 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 ZKSCAN5Q9Y2L8 839 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 PRSS21Q9Y6M0 314 aa14.29□□□□□ -0.12
PPP1CA-201ENST00000312989 CFAP46Q8IYW2 2715 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 CCDC78A2IDD5 438 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 CCDC162PA2VCL2 907 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 EFCAB7A8K855 629 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 A8MU76 341 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 UBXN7O94888 489 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 MTHFD1P11586 935 aaKnown RBP14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 ATP1B2P14415 290 aaPredicted RBP14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 VCLP18206 1134 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 PBLDP30039 288 aaPredicted RBP14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 MAPK9P45984 424 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 KCNJ1P48048 391 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 TMPRSS3P57727 454 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 ANKS6Q68DC2 871 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 TTC27Q6P3X3 843 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 GPR155Q7Z3F1 870 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 RBM12BQ8IXT5 1001 aaKnown RBP14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 CLDN19Q8N6F1 224 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 TTC9Q92623 222 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 ART4Q93070 314 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 AHCYL2Q96HN2 611 aaKnown RBP14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 C9orf72Q96LT7 481 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 TAAR9Q96RI9 348 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 RAB33BQ9H082 229 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 WWP1Q9H0M0 922 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 APMAPQ9HDC9 416 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 EIF2B3Q9NR50 452 aaKnown RBP14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 PAK5Q9P286 719 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 EPHA6Q9UF33 1036 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 RIMKLBQ9ULI2 386 aa14.28□□□□□ -0.12
PPP1CA-201ENST00000312989 CAPN5O15484 640 aaPredicted RBP14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 KIF1CO43896 1103 aaKnown RBP14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 UCNP55089 124 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 MC2RQ01718 297 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 CACNG1Q06432 222 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 VAC14Q08AM6 782 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 SEPT6Q14141 434 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 SEMA3AQ14563 771 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 TSTD2Q5T7W7 516 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 PRSS42Q7Z5A4 293 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 LINC00523Q86TU6 105 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 CXorf40BQ96DE9 158 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 NRTNQ99748 197 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 OR52A5Q9H2C5 316 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 ZNF768Q9H5H4 540 aaKnown RBP14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 KLHL3Q9UH77 587 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 NEU2Q9Y3R4 380 aa14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 CFAP20Q9Y6A4 193 aaKnown RBP14.27□□□□□ -0.12
PPP1CA-201ENST00000312989 TEX51A0A1B0GUA7 166 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 C17orf113A0A1B0GUU1 675 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 TCRBV7S3A2A0A539 114 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 MSNP26038 577 aaKnown RBP14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 CD82P27701 267 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 CSTF2P33240 577 aaKnown RBP eCLIP14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 ZRANB3Q5FWF4 1079 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 SNAP47Q5SQN1 464 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 ARHGAP40Q5TG30 622 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 PACS1Q6VY07 963 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 PLXDC1Q8IUK5 500 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 TRIM48Q8IWZ4 208 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 HM13Q8TCT9 377 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 KLHL6Q8WZ60 621 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 NKD1Q969G9 470 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 MS4A14Q96JA4 679 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 TGM7Q96PF1 710 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 UBL7Q96S82 380 aaPredicted RBP14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 CCNL2Q96S94 520 aaPredicted RBP14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 COG4Q9H9E3 785 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 FBXO8Q9NRD0 319 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 TREX1Q9NSU2 369 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 SMARCAL1Q9NZC9 954 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 TCAF1Q9Y4C2 921 aa14.26□□□□□ -0.13
PPP1CA-201ENST00000312989 KLHL33A6NCF5 533 aa14.25□□□□□ -0.13
PPP1CA-201ENST00000312989 ATXN7O15265 892 aaPredicted RBP14.25□□□□□ -0.13
PPP1CA-201ENST00000312989 TOX3O15405 576 aaPredicted RBP14.25□□□□□ -0.13
PPP1CA-201ENST00000312989 CEP104O60308 925 aa14.25□□□□□ -0.13
PPP1CA-201ENST00000312989 C1QL1O75973 258 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms