RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ETV5P41161 510 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 PAFAH1B1P43034 410 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 NPY2RP49146 381 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 PPM1FP49593 454 aaPredicted RBP11.8□□□□□ -0.52
SCFD1-201ENST00000311943 PRLHRP49683 370 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 PDE1BQ01064 536 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 ILKQ13418 452 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 SPIDRQ14159 915 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 GPR18Q14330 331 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 C16orf72Q14CZ0 275 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 ANKRD20A4Q4UJ75 823 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 UBAP2Q5T6F2 1119 aaKnown RBP11.8□□□□□ -0.52
SCFD1-201ENST00000311943 METRNLQ641Q3 311 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 FBXO38Q6PIJ6 1188 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 ABRAXAS1Q6UWZ7 409 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 ANKMY2Q8IV38 441 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 PPIL6Q8IXY8 311 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 RSC1A1Q92681 617 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 SLCO2A1Q92959 643 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 GLMNQ92990 594 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 NAT6Q93015 286 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 DCUN1D1Q96GG9 259 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 GFM1Q96RP9 751 aaKnown RBP11.8□□□□□ -0.52
SCFD1-201ENST00000311943 TIMM29Q9BSF4 260 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 EPB41L5Q9HCM4 733 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 APC2O95996 2303 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 MGAT4DA6NG13 374 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CCL4P13236 92 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 IDSP22304 550 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CCR7P32248 378 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 LEPRP48357 1165 aaKnown RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 PRKG2Q13237 762 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 BIRC2Q13490 618 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 RPE65Q16518 533 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 BBS9Q3SYG4 887 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CTSL3PQ5NE16 218 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CENPUQ71F23 418 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 GALNT15Q8N3T1 639 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 OR2L2Q8NH16 312 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 LRRC45Q96CN5 670 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CRELD1Q96HD1 420 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 PRR11Q96HE9 360 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 NAF1Q96HR8 494 aaKnown RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 SLC38A3Q99624 504 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CATSPERZQ9NTU4 200 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 KCNK4Q9NYG8 393 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 RPS6KL1Q9Y6S9 549 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 EPG5Q9HCE0 2579 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 TLX3O43711 291 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 ZNF189O75820 626 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 FASLGP48023 281 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 MPP1Q00013 466 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 E2F1Q01094 437 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 BOP1Q14137 746 aaKnown RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 DHX34Q14147 1143 aaKnown RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 GPR33Q49SQ1 333 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 BCL7AQ4VC05 210 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 FASTKD1Q53R41 847 aaKnown RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 HIBCHQ6NVY1 386 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 TRMT10BQ6PF06 316 aaKnown RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 AFTPHQ6ULP2 937 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CAPN12Q6ZSI9 719 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 OTUD6BQ8N6M0 293 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 GRK7Q8WTQ7 553 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 NCSTNQ92542 709 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 C12orf66Q96MD2 445 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 SLC30A3Q99726 388 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 COG4Q9H9E3 785 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 FBXO6Q9NRD1 293 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 RALYQ9UKM9 306 aaKnown RBP11.79□□□□□ -0.52
SCFD1-201ENST00000311943 CHMP2BQ9UQN3 213 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 AK5Q9Y6K8 562 aa11.79□□□□□ -0.52
SCFD1-201ENST00000311943 IGHV5-10-1A0A0J9YXX1 117 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 UBA6A0AVT1 1052 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-201ENST00000311943 EFCAB8A8MWE9 144 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-201ENST00000311943 BRINP1O60477 761 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 NIPSNAP2O75323 286 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 SEC31AO94979 1220 aaKnown RBP11.78□□□□□ -0.52
SCFD1-201ENST00000311943 TPBGLP0DKB5 382 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 ERVK-10P10266 1014 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 FMO4P31512 558 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 FOXK2Q01167 660 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 MAP9Q49MG5 647 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 PHF19Q5T6S3 580 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 C4orf22Q6V702 233 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 CERS6Q6ZMG9 384 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 RBM44Q6ZP01 1051 aaKnown RBP11.78□□□□□ -0.52
SCFD1-201ENST00000311943 TMEM135Q86UB9 458 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 SLITRK4Q8IW52 837 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 NOA1Q8NC60 698 aaKnown RBP11.78□□□□□ -0.52
SCFD1-201ENST00000311943 MCUQ8NE86 351 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 ULK4Q96C45 1275 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 BIRC8Q96P09 236 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 XKR8Q9H6D3 395 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 ZMIZ1Q9ULJ6 1067 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 PLAGL1Q9UM63 463 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms