RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 A0A1B0GTL3 188 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 IDH3BO43837 385 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 SEC22BO75396 215 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 CCNKO75909 580 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 ARHGEF7Q14155 803 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 TAB1Q15750 504 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 SERINC5Q86VE9 423 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 DPY30Q9C005 99 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 OSBPL2Q9H1P3 480 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 KLQ9UEF7 1012 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF510Q9Y2H8 683 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 PMF1-BGLAPU3KQ54 211 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 ATG2BQ96BY7 2078 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 SEPT4O43236 478 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 PSMD3O43242 534 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 SLC22A3O75751 556 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 CKBP12277 381 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 HLA-DPA1P20036 260 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 MC4RP32245 332 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 ACLYP53396 1101 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 PRKG2Q13237 762 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 AAK1Q2M2I8 961 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 SLC2A7Q6PXP3 512 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 LZTR1Q8N653 840 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 OR4L1Q8NH43 312 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 TMBIM1Q969X1 311 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 PTERQ96BW5 349 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 MAGED4Q96JG8 741 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 OLAHQ9NV23 265 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 UBA2Q9UBT2 640 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 PDE10AQ9Y233 779 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 POLR3HQ9Y535 204 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-201ENST00000309428 PCDHGA7Q9Y5G6 932 aa12.51□□□□□ -0.41
RETREG3-201ENST00000309428 OXSR1O95747 527 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 C1RP00736 705 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 COL6A2P12110 1019 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 PBLDP30039 288 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 CORO1AP31146 461 aaKnown RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 TBC1D21Q8IYX1 336 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 MCOLN3Q8TDD5 553 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 SOCS4Q8WXH5 440 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 LRRC58Q96CX6 371 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 FCRL5Q96RD9 977 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 ZDHHC4Q9NPG8 344 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 EIF2B3Q9NR50 452 aaKnown RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 WWOXQ9NZC7 414 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 EHD3Q9NZN3 535 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 MTRRQ9UBK8 725 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 SUCOQ9UBS9 1254 aaKnown RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 GMPPBQ9Y5P6 360 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 ARID1BQ8NFD5 2236 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 A0A087X1B8 175 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 ANGPTL1O95841 491 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF26P17031 533 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 TACR2P21452 398 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 NFATC3Q12968 1075 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 DEPDC1Q5TB30 811 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 RSPO2Q6UXX9 243 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 AKAP14Q86UN6 197 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 KDM1BQ8NB78 822 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 SPPL2AQ8TCT8 520 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 PYCR2Q96C36 320 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 SLC9A7Q96T83 725 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 COQ7Q99807 217 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 PRDM8Q9NQV8 689 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 PSME2Q9UL46 239 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 SPO11Q9Y5K1 396 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 PTPRFP10586 1907 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 OR4F21O95013 312 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 FUCA1P04066 466 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 CYP2C18P33260 490 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 OPRL1P41146 370 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 UFM1P61960 85 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 BOP1Q14137 746 aaKnown RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 GRM2Q14416 872 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 FAM91A1Q658Y4 838 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 TXNDC8Q6A555 127 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 DENND5AQ6IQ26 1287 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 MBOAT1Q6ZNC8 495 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 SLC24A5Q71RS6 500 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 RTN4RL1Q86UN2 441 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 LSMEM2Q8N112 164 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 STYXQ8WUJ0 223 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 FBXO44Q9H4M3 255 aa12.5□□□□□ -0.41
RETREG3-201ENST00000309428 LEF1Q9UJU2 399 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-201ENST00000309428 C2orf78A6NCI8 922 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 NME4O00746 187 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 TBL1XO60907 577 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 CLPXO76031 633 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 ATP5C1P36542 298 aaKnown RBP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 HSPA14Q0VDF9 509 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SEMA3AQ14563 771 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 HIPK1Q86Z02 1210 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms