RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MMP12P39900 470 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 CCR5P51681 352 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 WNT3AP56704 352 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 CDK18Q07002 472 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 ELP6Q0PNE2 266 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TMEM52BQ4KMG9 183 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TCTE1Q5JU00 501 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 COX20Q5RI15 118 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3GQ6DHY5 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3CQ6IPX1 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 RANBP10Q6VN20 620 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 ZNF572Q7Z3I7 529 aaPredicted RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 LRRTM4Q86VH4 590 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 P3H2Q8IVL5 708 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TMEFF1Q8IYR6 380 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3Q8IZP1 549 aaPredicted RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 SUMF1Q8NBK3 374 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 ZBTB34Q8NCN2 500 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 PDCD6IPQ8WUM4 868 aaKnown RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 SLC35B4Q969S0 331 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 NCLNQ969V3 563 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 LOXL4Q96JB6 756 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 FEM1CQ96JP0 617 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 LENG8Q96PV6 779 aaPredicted RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 LYSMD1Q96S90 227 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 MLPHQ9BV36 600 aaPredicted RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 IARS2Q9NSE4 1012 aaKnown RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 PAK5Q9P286 719 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 DOLKQ9UPQ8 538 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 CACNA1EQ15878 2313 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 KNL1Q8NG31 2342 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 BPTFQ12830 3046 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 RIF1Q5UIP0 2472 aaKnown RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 ERI2A8K979 691 aaKnown RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 PMPCBO75439 489 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 NDST3O95803 873 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ATXN1LP0C7T5 689 aaKnown RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 ETS1P14921 441 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ITIH2P19823 946 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 RPL22P35268 128 aaKnown RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 ADRA1AP35348 466 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 NUDT1P36639 197 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 FDFT1P37268 417 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 PTGER3P43115 390 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 GRIA4P48058 902 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 GEMP55040 296 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 PPP2CBP62714 309 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 RPS21P63220 83 aaKnown RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 PPP2CAP67775 309 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 CREB5Q02930 508 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 GABPB1Q06547 395 aaPredicted RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 ACTN3Q08043 901 aaPredicted RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 RALGDSQ12967 914 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 TUBB2AQ13885 445 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 LRP8Q14114 963 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ERV3-1Q14264 604 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 PRPSAP1Q14558 356 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 AGERQ15109 404 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 SLC1A5Q15758 541 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 CDKN3Q16667 212 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ZNF284Q2VY69 593 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 FBXO48Q5FWF7 155 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 LRRC73Q5JTD7 316 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 PEAR1Q5VY43 1037 aaPredicted RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 KIAA0895LQ68EN5 471 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 KIAA1161Q6NSJ0 714 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 DPPA4Q7L190 304 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 GSTA5Q7RTV2 222 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 SPATA21Q7Z572 469 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 PRUNE1Q86TP1 453 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 HORMAD1Q86X24 394 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 NKAIN4Q8IVV8 208 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 SPATA4Q8NEY3 305 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 LILRB4Q8NHJ6 448 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 CEP70Q8NHQ1 597 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 KIF18AQ8NI77 898 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 IFI44Q8TCB0 444 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 USP7Q93009 1102 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 BIRC7Q96CA5 298 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ORAI3Q9BRQ5 295 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 TUBB2BQ9BVA1 445 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 DDX47Q9H0S4 455 aaKnown RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 C1orf21Q9H246 121 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 RASSF4Q9H2L5 321 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 MMADHCQ9H3L0 296 aaPredicted RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 EBF2Q9HAK2 575 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ETNK1Q9HBU6 452 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ACTR3BQ9P1U1 418 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ITGB1BP2Q9UKP3 347 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ZFR2Q9UPR6 939 aaKnown RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 C15orf41Q9Y2V0 281 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 ZFHX2Q9C0A1 2572 aaPredicted RBP8.16□□□□□ -1.1
CHD6-201ENST00000309279 ZNF292O60281 2723 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 RALGAPA1Q6GYQ0 2036 aa8.16□□□□□ -1.1
CHD6-201ENST00000309279 EP300Q09472 2414 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms