RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 VPS35Q96QK1 796 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 FAM129BQ96TA1 746 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 ZSCAN5AQ9BUG6 496 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 SPATA16Q9BXB7 569 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 TAS2R1Q9NYW7 299 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 PCTPQ9UKL6 214 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 HCN2Q9UL51 889 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 TRAF6Q9Y4K3 522 aa11.71□□□□□ -0.54
TRIM40-205ENST00000307859 TRPM6Q9BX84 2022 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 TBC1D3BA6NDS4 549 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 FADS2P1A8MWK0 482 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 SPECC1L-ADORA2AF8WAN1 911 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 AREL1O15033 823 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 SLC22A2O15244 555 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 GALR2O43603 387 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 KAT7O95251 611 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 OR56A5P0C7T3 313 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 ELFN1P0C7U0 828 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 NCF2P19878 526 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 ADSLP30566 484 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 IL12RB1P42701 662 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 MTHFRP42898 656 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 METAP1P53582 386 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 DLX2Q07687 328 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 ITPRIPL2Q3MIP1 535 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 UGT3A2Q3SY77 523 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 POM121L1PQ3SYA9 428 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 PREPLQ4J6C6 727 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 CYP2U1Q7Z449 544 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 CPSF7Q8N684 471 aaKnown RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 PDPRQ8NCN5 879 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 ACTRT2Q8TDY3 377 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 AGAP11Q8TF27 550 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 COQ10AQ96MF6 247 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 RIOK2Q9BVS4 552 aaKnown RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 FAM126AQ9BYI3 521 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-205ENST00000307859 ITM2BQ9Y287 266 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 OARD1Q9Y530 152 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 DOCK9Q9BZ29 2069 aa11.7□□□□□ -0.54
TRIM40-205ENST00000307859 LOC730098B7Z3J9 87 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 RAD51BO15315 384 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 GYG2O15488 501 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 SNX2O60749 519 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 SKAP2O75563 359 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-205ENST00000307859 AP2A2O94973 939 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 ENO3P13929 434 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-205ENST00000307859 ATP1B2P14415 290 aaPredicted RBP11.69□□□□□ -0.54
TRIM40-205ENST00000307859 TSPAN8P19075 237 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 AOAHP28039 575 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 GDI1P31150 447 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 GRIA2P42262 883 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 AGTR2P50052 363 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 CREB5Q02930 508 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 ELP6Q0PNE2 266 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 KLF10Q13118 480 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 RIPK1Q13546 671 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 ENPP2Q13822 863 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 NAA25Q14CX7 972 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 PCBP2Q15366 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRIM40-205ENST00000307859 ZNF284Q2VY69 593 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 KANK2Q63ZY3 851 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 CYHR1Q6ZMK1 362 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 FRA10AC1Q70Z53 315 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 DSG4Q86SJ6 1040 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 TMPRSS6Q8IU80 811 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 CLYBLQ8N0X4 340 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 PELI3Q8N2H9 469 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 TEX9Q8N6V9 391 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 SUSD6Q92537 303 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 DTD2Q96FN9 168 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 PPP1R16AQ96I34 528 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 CADM1Q9BY67 442 aaKnown RBP11.69□□□□□ -0.54
TRIM40-205ENST00000307859 ABCG8Q9H221 673 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 C1orf21Q9H246 121 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 ZBTB26Q9HCK0 441 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 MID1IP1Q9NPA3 183 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 PRSS16Q9NQE7 514 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 KLC4Q9NSK0 619 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRIM40-205ENST00000307859 CD274Q9NZQ7 290 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 SUN2Q9UH99 717 aa11.69□□□□□ -0.54
TRIM40-205ENST00000307859 NCF1BA6NI72 391 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 NCF1CA8MVU1 366 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 B2RBV5 119 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CFAP99D6REC4 459 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 C1QTNF3-AMACRE9PGA6 284 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 E2F3O00716 465 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 PPP6CO00743 305 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 WNT9AO14904 365 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 AZIN1O14977 448 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 GSC2O15499 205 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 FFAR2O15552 330 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 SGTAO43765 313 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 MLYCDO95822 493 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 APODP05090 189 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 ADRB3P13945 408 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 NCF1P14598 390 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 AKT1P31749 480 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms