RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SEC16BQ96JE7 1060 aa9.14□□□□□ -0.95
PTPRE-202ENST00000306042 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
PTPRE-202ENST00000306042 MIPEPQ99797 713 aa9.14□□□□□ -0.95
PTPRE-202ENST00000306042 TRMOQ9BU70 441 aa9.14□□□□□ -0.95
PTPRE-202ENST00000306042 PCDH10Q9P2E7 1040 aa9.14□□□□□ -0.95
PTPRE-202ENST00000306042 BTRCQ9Y297 605 aa9.14□□□□□ -0.95
PTPRE-202ENST00000306042 ADAMTSL1Q8N6G6 1762 aa9.14□□□□□ -0.95
PTPRE-202ENST00000306042 EVPLQ92817 2033 aa9.14□□□□□ -0.95
PTPRE-202ENST00000306042 NIPSNAP2O75323 286 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ENO2P09104 434 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 EPORP19235 508 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 HNRNPA2B1P22626 353 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ALDH6A1Q02252 535 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 FASTKD3Q14CZ7 662 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ADGRD2Q7Z7M1 963 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CLDN19Q8N6F1 224 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CHST14Q8NCH0 376 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 GSTCDQ8NEC7 633 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 HM13Q8TCT9 377 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM174Q8WUU8 243 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 IPPKQ9H8X2 491 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 EIF2B4Q9UI10 523 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CCL26Q9Y258 94 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 YBX2Q9Y2T7 364 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 MTF2Q9Y483 593 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 LAMA4Q16363 1823 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 OR5K4A6NMS3 321 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 H3BQF6 201 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 MAFKO60675 156 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM63AO94886 807 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CLDN9O95484 217 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 PRAMEF12O95522 483 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 GRIA1P42261 906 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 RABIFP47224 123 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 PTPN5P54829 565 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CHIT1Q13231 466 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 DPYSQ14117 519 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 GRIN2CQ14957 1233 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 PRKD1Q15139 912 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CYP1B1Q16678 543 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF542PQ5EBM4 170 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CCNYL2Q5T2Q4 361 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 FSTL4Q6MZW2 842 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM145Q8NBT3 493 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 OR4E2Q8NGC2 313 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF75CPQ92670 426 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 GLYATL1Q969I3 302 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 IMP4Q96G21 291 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM237Q96Q45 408 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 AGAP2Q99490 1192 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 KCNK12Q9HB15 430 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 KCNK4Q9NYG8 393 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 PRKAG3Q9UGI9 489 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ACTL7BQ9Y614 415 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 RRP8O43159 456 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 OAS1P00973 400 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TYRP1P17643 537 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TNFRSF4P43489 277 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ACAP2Q15057 778 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 PAQR9Q6ZVX9 377 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 CHMP1BQ7LBR1 199 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TRPM8Q7Z2W7 1104 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 OR2T34Q8NGX1 318 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ELSPBP1Q96BH3 223 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 HSPA12BQ96MM6 686 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 SIKE1Q9BRV8 207 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ACSL5Q9ULC5 683 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TMCC3Q9ULS5 477 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 COLQQ9Y215 455 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 QSER1Q2KHR3 1735 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 PLK4O00444 970 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 FAM155BO75949 473 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF682O95780 498 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ERFP50548 548 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TSNQ15631 228 aaKnown RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 UNC5BQ8IZJ1 945 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 NXPE1Q8N323 547 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 TRAM1L1Q8N609 369 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 OSER1Q9NX31 292 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 H2AFY2Q9P0M6 372 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-202ENST00000306042 KCTD3Q9Y597 815 aa9.13□□□□□ -0.95
PTPRE-202ENST00000306042 ECI2O75521 394 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 EPN2O95208 641 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 NTRK1P04629 796 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 HOXC13P31276 330 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 SLC6A4P31645 630 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 SEPHS1P49903 392 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 TAS2R39P59534 338 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 COPZ1P61923 177 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 EGFLAMQ63HQ2 1017 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 EID3Q8N140 333 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 ASB16Q96NS5 453 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CCDC167Q9P0B6 97 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 KHNYNO15037 678 aaKnown RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 NUDT17P0C025 328 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 VAV1P15498 845 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 GSCP56915 257 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CLEC4FQ8N1N0 589 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 ICA1LQ8NDH6 482 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms