RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ARVCFO00192 962 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 MGEA5O60502 916 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 KRT6AP02538 564 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 KRT6BP04259 564 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 G6PDP11413 515 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 PCSK6P29122 969 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 KRT6CP48668 564 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 STARD3Q14849 445 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 PIK3R6Q5UE93 754 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 ISCA2Q86U28 154 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 TBC1D21Q8IYX1 336 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 BRSK1Q8TDC3 778 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
SDC2-201ENST00000302190 OSBPL2Q9H1P3 480 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 POLR3BQ9NW08 1133 aaPredicted RBP13.88□□□□□ -0.19
SDC2-201ENST00000302190 ZNF490Q9ULM2 529 aaPredicted RBP13.88□□□□□ -0.19
SDC2-201ENST00000302190 EPB42P16452 691 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 SEPHS1P49903 392 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 GATMP50440 423 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 BCL2L1Q07817 233 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 PCBP1Q15365 356 aaKnown RBP eCLIP13.87□□□□□ -0.191e-14■■□□□ 12.9
SDC2-201ENST00000302190 OR7A2PQ8NGA2 310 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 FAM110BQ8TC76 370 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 MUS81Q96NY9 551 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 EBPLQ9BY08 206 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 NSUN3Q9H649 340 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 INIPQ9NRY2 104 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 CD84Q9UIB8 345 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 FAM32AQ9Y421 112 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 CHD7Q9P2D1 2997 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 RGS14O43566 566 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 MTX2O75431 263 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 SERPINB10P48595 397 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 HCAR3P49019 387 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 EGFLAMQ63HQ2 1017 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 DDX53Q86TM3 631 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 SYTL1Q8IYJ3 562 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 ZNF540Q8NDQ6 660 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 PSMA8Q8TAA3 256 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 RAD21L1Q9H4I0 556 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 NOL6Q9H6R4 1146 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 TNFRSF12AQ9NP84 129 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 IFT80Q9P2H3 777 aaPredicted RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 SNX8Q9Y5X2 465 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 PRMT5O14744 637 aaPredicted RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 FADS2O95864 444 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 GSTT2P0CG29 244 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 GSTT2BP0CG30 244 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 DBTP11182 482 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 PFKPQ01813 784 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 GSTM4Q03013 218 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 CRTC3Q6UUV7 619 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 GALNT10Q86SR1 603 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 CCDC103Q8IW40 242 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 OR52J3Q8NH60 311 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 PTCD2Q8WV60 388 aaKnown RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 PRICKLE1Q96MT3 831 aaPredicted RBP13.87□□□□□ -0.19
SDC2-201ENST00000302190 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 ATP11BQ9Y2G3 1177 aa13.87□□□□□ -0.19
SDC2-201ENST00000302190 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 PRAMEF1O95521 474 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 S1PR4O95977 384 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 GSRP00390 522 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 THRBP10828 461 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 COL6A1P12109 1028 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 SERPINB1P30740 379 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 ATP6V0D1P61421 351 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 FAM91A1Q658Y4 838 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 MSANTD2Q6P1R3 559 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 RANBP10Q6VN20 620 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 SYT12Q8IV01 421 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 GTF2IRD1Q9UHL9 959 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 USP3Q9Y6I4 520 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 NADKO95544 446 aaPredicted RBP13.86□□□□□ -0.19
SDC2-201ENST00000302190 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 ERMP1Q7Z2K6 904 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 HS3ST5Q8IZT8 346 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 IRGQQ8WZA9 623 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 TMBIM1Q969X1 311 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 PANX1Q96RD7 426 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 FAIMQ9NVQ4 179 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 RIMS3Q9UJD0 308 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 LSM7Q9UK45 103 aaKnown RBP13.86□□□□□ -0.19
SDC2-201ENST00000302190 ARID1BQ8NFD5 2236 aaPredicted RBP13.86□□□□□ -0.19
SDC2-201ENST00000302190 MGAT4DA6NG13 374 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 ZNF487B1APH4 448 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 ZNF197O14709 1029 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 CDH2P19022 906 aaPredicted RBP13.86□□□□□ -0.19
SDC2-201ENST00000302190 UPP1Q16831 310 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 PDCD4Q53EL6 469 aaKnown RBP13.86□□□□□ -0.19
SDC2-201ENST00000302190 MFSD6LQ8IWD5 586 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 CMTR2Q8IYT2 770 aaKnown RBP13.86□□□□□ -0.19
SDC2-201ENST00000302190 C2orf73Q8N5S3 287 aaPredicted RBP13.86□□□□□ -0.19
SDC2-201ENST00000302190 TRPV3Q8NET8 790 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 BIRC7Q96CA5 298 aa13.86□□□□□ -0.19
SDC2-201ENST00000302190 MAGED4Q96JG8 741 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms