RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CSO75390 466 aaKnown RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 TCEA3O75764 348 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 GSTA1P08263 222 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 PRSS56P0CW18 603 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 RPL10P27635 214 aaKnown RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 PBLDP30039 288 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 ARSDP51689 593 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 OR1D5P58170 312 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 CRADDP78560 199 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 SEPT7Q16181 437 aaKnown RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 C11orf91Q3C1V1 193 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 AMZ1Q400G9 498 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 LRRC8BQ6P9F7 803 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 CYB5D1Q6P9G0 228 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 C11orf96Q7Z7L8 435 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 SLC9B2Q86UD5 537 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 SFRP1Q8N474 314 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 BEND7Q8N7W2 519 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 SLC37A2Q8TED4 501 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 NAT14Q8WUY8 206 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 ZNF778Q96MU6 729 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 IL22Q9GZX6 179 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 SLC2A6Q9UGQ3 507 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 AK5Q9Y6K8 562 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 ZFC3H1O60293 1989 aaKnown RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 TPRP12270 2363 aaKnown RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 UNC13CQ8NB66 2214 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 A0A1W2PQM1 296 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 CCDC162PA2VCL2 907 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 OR51F1A6NGY5 319 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 B4GAT1O43505 415 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ATP1B2P14415 290 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 MGAT1P26572 445 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 DRG2P55039 364 aaKnown RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 PRAMEP78395 509 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 B4GALNT1Q00973 533 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 CUL1Q13616 776 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 KCNJ11Q14654 390 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ZKSCAN8Q15776 578 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 USP53Q70EK8 1073 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 SPRED1Q7Z699 444 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 KLHL7Q8IXQ5 586 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 TTC1Q99614 292 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 SLC38A3Q99624 504 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 FAM8A1Q9UBU6 413 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ANAPC5Q9UJX4 755 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 RIMKLBQ9ULI2 386 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ATXN7L1Q9ULK2 861 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 MYLKQ15746 1914 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 TRBV5-4A0A0C4DH59 114 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 KIR2DS5A0A0G2JLQ3 304 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 A0A0G2JNG1 304 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 GOLGA8MH3BSY2 632 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 KIR2DS3K7RE56 304 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 PSMA3P25788 255 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ACRV1P26436 265 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 GPR3P46089 330 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 HHEXQ03014 270 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 KIR2DS5Q14953 304 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ISXQ2M1V0 245 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 FASTKD1Q53R41 847 aaKnown RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ANKRD22Q5VYY1 191 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ZNF761Q86XN6 746 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 TRIM48Q8IWZ4 208 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 PIANPQ8IYJ0 282 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 OR13J1Q8NGT2 312 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 OR4L1Q8NH43 312 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 CPT1BQ92523 772 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 SH3KBP1Q96B97 665 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 CCDC86Q9H6F5 360 aaKnown RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 KCNK4Q9NYG8 393 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 SCHIP1Q9P0W5 487 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-201ENST00000296503 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 NEU2Q9Y3R4 380 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 PCDHB1Q9Y5F3 818 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
HMGB2-201ENST00000296503 SPEGQ15772 3267 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 A6NCN8 305 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 MGAT4DA6NG13 374 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 GOLGA6L10A6NI86 522 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 AVILO75366 819 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 GOT2P00505 430 aaKnown RBP11.86□□□□□ -0.51
HMGB2-201ENST00000296503 VIPP01282 170 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 PROS1P07225 676 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 HALP42357 657 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 FASLGP48023 281 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 CYP4F3Q08477 520 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 NFE2L1Q14494 772 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 CASC4Q6P4E1 433 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 AFTPHQ6ULP2 937 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 ABRAXAS1Q6UWZ7 409 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 PIM3Q86V86 326 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 CFAP206Q8IYR0 622 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 N4BP2L2Q92802 583 aaPredicted RBP11.86□□□□□ -0.51
HMGB2-201ENST00000296503 PEX13Q92968 403 aa11.86□□□□□ -0.51
HMGB2-201ENST00000296503 AHCYL2Q96HN2 611 aaKnown RBP11.86□□□□□ -0.51
HMGB2-201ENST00000296503 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms