RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 POT1Q9NUX5 634 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 NLE1Q9NVX2 485 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 AKAP7Q9P0M2 348 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 KLHL3Q9UH77 587 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 CRLS1Q9UJA2 301 aa14.14□□□□□ -0.15
HMGN3-201ENST00000275036 MN1Q10571 1320 aaPredicted RBP14.14□□□□□ -0.15
HMGN3-201ENST00000275036 ZNF462Q96JM2 2506 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 MGAT4DA6NG13 374 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 MROH6A6NGR9 719 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 B4E171 279 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 H7C0S8 307 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 PSMD3O43242 534 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 UBXN7O94888 489 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 SUN1O94901 812 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 C9P02748 559 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 ZSCAN5DPP0CG00 497 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 SPTBP11277 2137 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 ITGALP20701 1170 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 PSMA3P25788 255 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 TSPAN7P41732 249 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 CYP4F2P78329 520 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 RPE65Q16518 533 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 LINC00303Q3SY05 128 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 BCL7AQ4VC05 210 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 CCDC38Q502W7 563 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 TAF1BQ53T94 588 aaPredicted RBP14.13□□□□□ -0.15
HMGN3-201ENST00000275036 FAM129CQ86XR2 697 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 PIANPQ8IYJ0 282 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 TRIM58Q8NG06 486 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 OR2L2Q8NH16 312 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 RSC1A1Q92681 617 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 ULK4Q96C45 1275 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 LRRC45Q96CN5 670 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 CXorf40BQ96DE9 158 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 CDKN2AIPNLQ96HQ2 116 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 ZNF514Q96K75 400 aaPredicted RBP14.13□□□□□ -0.15
HMGN3-201ENST00000275036 CTRCQ99895 268 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 DDA1Q9BW61 102 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 SPRY4Q9C004 299 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 EPB41L1Q9H4G0 881 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 APMAPQ9HDC9 416 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 SLC39A1Q9NY26 324 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 FAM8A1Q9UBU6 413 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 PCDHGA4Q9Y5G9 962 aa14.13□□□□□ -0.15
HMGN3-201ENST00000275036 CFAP20Q9Y6A4 193 aaKnown RBP14.13□□□□□ -0.15
HMGN3-201ENST00000275036 HELZ2Q9BYK8 2649 aaKnown RBP14.12□□□□□ -0.15
HMGN3-201ENST00000275036 IGLV3-16A0A075B6K0 115 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 OR51F1A6NGY5 319 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 STMND1H3BQB6 276 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 FGGP02679 453 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 ACRV1P26436 265 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 CD82P27701 267 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 CXCR5P32302 372 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 FDFT1P37268 417 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 LEPRP48357 1165 aaKnown RBP14.12□□□□□ -0.15
HMGN3-201ENST00000275036 PRLHRP49683 370 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 SEMA5AQ13591 1074 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 CCNG2Q16589 344 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 ZRANB3Q5FWF4 1079 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 MANEAQ5SRI9 462 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 DUS1LQ6P1R4 473 aaKnown RBP14.12□□□□□ -0.15
HMGN3-201ENST00000275036 LINC00523Q86TU6 105 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 SERPINA9Q86WD7 417 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 EXD3Q8N9H8 876 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
HMGN3-201ENST00000275036 STYXQ8WUJ0 223 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 NKD1Q969G9 470 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 RNF31Q96EP0 1072 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 WBP1Q96G27 269 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 LINC00615Q96LM1 132 aaPredicted RBP14.12□□□□□ -0.15
HMGN3-201ENST00000275036 INSM2Q96T92 566 aaPredicted RBP14.12□□□□□ -0.15
HMGN3-201ENST00000275036 COPS8Q99627 209 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 WWP1Q9H0M0 922 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 RAB6BQ9NRW1 208 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 SIDT1Q9NXL6 827 aaKnown RBP14.12□□□□□ -0.15
HMGN3-201ENST00000275036 ZDHHC3Q9NYG2 299 aa14.12□□□□□ -0.15
HMGN3-201ENST00000275036 SNRNP200O75643 2136 aaKnown RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 ERI2A8K979 691 aaKnown RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 CAPN5O15484 640 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 KIF1CO43896 1103 aaKnown RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 MTHFD1P11586 935 aaKnown RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 ATP1B2P14415 290 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 RPL22P35268 128 aaKnown RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 HALP42357 657 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 CAPZBP47756 277 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 KCNJ1P48048 391 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 PPP1CAP62136 330 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 MC2RQ01718 297 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 C19orf57Q0VDD7 668 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 CDH17Q12864 832 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 GPR33Q49SQ1 333 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 ZNF658BQ4V348 819 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 TMEM164Q5U3C3 297 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 DRICH1Q6PGQ1 229 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 PLXDC1Q8IUK5 500 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 RBM12BQ8IXT5 1001 aaKnown RBP14.11□□□□□ -0.15
HMGN3-201ENST00000275036 OR13J1Q8NGT2 312 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 DCUN1D1Q96GG9 259 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 C9orf72Q96LT7 481 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 RMDN2Q96LZ7 410 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms