RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 DPPA4Q7L190 304 aa15.08■□□□□ 0
SF3B4-201ENST00000271628 DEFB107AQ8IZN7 70 aa15.08■□□□□ 0
SF3B4-201ENST00000271628 TIFAQ96CG3 184 aa15.08■□□□□ 0
SF3B4-201ENST00000271628 DCUN1D1Q96GG9 259 aa15.08■□□□□ 0
SF3B4-201ENST00000271628 TSC22D3Q99576 134 aa15.08■□□□□ 0
SF3B4-201ENST00000271628 ZSCAN5AQ9BUG6 496 aa15.08■□□□□ 0
SF3B4-201ENST00000271628 G3BP2Q9UN86 482 aaKnown RBP15.08■□□□□ 0
SF3B4-201ENST00000271628 POMPQ9Y244 141 aa15.08■□□□□ 0
SF3B4-201ENST00000271628 PRRT4C9JH25 899 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 E2F3O00716 465 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 KPNA5O15131 536 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 FFAR2O15552 330 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 AHCYL1O43865 530 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 VPS4BO75351 444 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 CRCPO75575 148 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 CHEK2O96017 543 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 ATP1B2P14415 290 aaPredicted RBP15.07■□□□□ 0
SF3B4-201ENST00000271628 MTTPP55157 894 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 SQLEQ14534 574 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 MAPRE2Q15555 327 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 PPP1R3AQ16821 1122 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 RFLNAQ6ZTI6 216 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 HOMEZQ8IX15 550 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 TRAM1L1Q8N609 369 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 PDPRQ8NCN5 879 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 TMIEQ8NEW7 156 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 LKAAEAR1Q8TD35 194 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 SLC26A7Q8TE54 656 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 TWIST2Q8WVJ9 160 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 MRPL38Q96DV4 380 aaKnown RBP15.07■□□□□ 0
SF3B4-201ENST00000271628 CCT7Q99832 543 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 NUSAP1Q9BXS6 441 aaKnown RBP15.07■□□□□ 0
SF3B4-201ENST00000271628 FAM192AQ9GZU8 254 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 RDH14Q9HBH5 336 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 SLC24A3Q9HC58 644 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 UTP6Q9NYH9 597 aaKnown RBP15.07■□□□□ 0
SF3B4-201ENST00000271628 PLXNB3Q9ULL4 1909 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 EDDM13A0A1B0GTR0 161 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 PSMD11O00231 422 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 PPP6CO00743 305 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 UROSP10746 265 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 PEX19P40855 299 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 SLC6A11P48066 632 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 PKNOX1P55347 436 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 B4GALNT1Q00973 533 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 CCNIQ14094 377 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 GAB4Q2WGN9 574 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 HNRNPA1L2Q32P51 320 aaKnown RBP15.07■□□□□ 0
SF3B4-201ENST00000271628 FNDC3BQ53EP0 1204 aaKnown RBP15.07■□□□□ 0
SF3B4-201ENST00000271628 METTL2BQ6P1Q9 378 aaKnown RBP15.07■□□□□ 0
SF3B4-201ENST00000271628 HSD11B1LQ7Z5J1 315 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 CHCHD4Q8N4Q1 142 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 CPA6Q8N4T0 437 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 PYDC1Q8WXC3 89 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 NXPE3Q969Y0 559 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 CD84Q9UIB8 345 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 CDH7Q9ULB5 785 aa15.07■□□□□ 0
SF3B4-201ENST00000271628 RANBP2P49792 3224 aaKnown RBP15.06■□□□□ 0
SF3B4-201ENST00000271628 PIKFYVEQ9Y2I7 2098 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 OTOL1A6NHN0 477 aaPredicted RBP15.06■□□□□ 0
SF3B4-201ENST00000271628 QSOX1O00391 747 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 LYNP07948 512 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 FCARP24071 287 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 AKT1P31749 480 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 AGTR2P50052 363 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 ATP4BP51164 291 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 FCHO2Q0JRZ9 810 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 TBL3Q12788 808 aaKnown RBP15.06■□□□□ 0
SF3B4-201ENST00000271628 ZNF284Q2VY69 593 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 C16orf89Q6UX73 402 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 CYHR1Q6ZMK1 362 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 Q6ZVL8 140 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 SNX32Q86XE0 403 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 PDSS2Q86YH6 399 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 OR8D1Q8WZ84 308 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 MTG2Q9H4K7 406 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 EFCAB1Q9HAE3 211 aa15.06■□□□□ 0
SF3B4-201ENST00000271628 PRPF19Q9UMS4 504 aaKnown RBP15.06■□□□□ 0
SF3B4-201ENST00000271628 PRRC2BQ5JSZ5 2229 aaKnown RBP15.06■□□□□ 0
SF3B4-201ENST00000271628 H0Y858 1186 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 KPNA3O00505 521 aaPredicted RBP15.05■□□□□ 0
SF3B4-201ENST00000271628 AP2A2O94973 939 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 ELFN1P0C7U0 828 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 VCLP18206 1134 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 MMP12P39900 470 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 ERFP50548 548 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 STX5Q13190 355 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 RUNX3Q13761 415 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 ELAVL3Q14576 367 aaKnown RBP15.05■□□□□ 0
SF3B4-201ENST00000271628 RBBP7Q16576 425 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 CDKL4Q5MAI5 379 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 HENMT1Q5T8I9 393 aaKnown RBP15.05■□□□□ 0
SF3B4-201ENST00000271628 TANGO2Q6ICL3 276 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 SULT1C3Q6IMI6 304 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 KBTBD6Q86V97 674 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 NRSN1Q8IZ57 195 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 ZNF366Q8N895 744 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 TERB1Q8NA31 727 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 KYQ8NBH2 561 aa15.05■□□□□ 0
SF3B4-201ENST00000271628 ZNF382Q96SR6 550 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms