RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 EGFLAMQ63HQ2 1017 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 ASRGL1Q7L266 308 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 GPSM1Q86YR5 675 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 CLDN19Q8N6F1 224 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 LKAAEAR1Q8TD35 194 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 ATOH1Q92858 354 aaPredicted RBP15.13■□□□□ 0.01
COPS3-201ENST00000268717 CCDC97Q96F63 343 aaPredicted RBP15.13■□□□□ 0.01
COPS3-201ENST00000268717 DCUN1D1Q96GG9 259 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 P2RY13Q9BPV8 354 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 CCDC28BQ9BUN5 200 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 FBRSQ9HAH7 460 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 LMAN1LQ9HAT1 526 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 SARS2Q9NP81 518 aaKnown RBP15.13■□□□□ 0.01
COPS3-201ENST00000268717 IKZF3Q9UKT9 509 aa15.13■□□□□ 0.01
COPS3-201ENST00000268717 GRID2O43424 1007 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 GM2AP17900 193 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 LIG3P49916 1009 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 CAMK2GQ13555 558 aaPredicted RBP15.12■□□□□ 0.01
COPS3-201ENST00000268717 PFKFB4Q16877 469 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 METTL2BQ6P1Q9 378 aaKnown RBP15.12■□□□□ 0.01
COPS3-201ENST00000268717 CUZD1Q86UP6 607 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 BTN2A2Q8WVV5 523 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 SCAMP4Q969E2 229 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 MAELQ96JY0 434 aaKnown RBP15.12■□□□□ 0.01
COPS3-201ENST00000268717 RIOK2Q9BVS4 552 aaKnown RBP15.12■□□□□ 0.01
COPS3-201ENST00000268717 ABCG8Q9H221 673 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 CHRDQ9H2X0 955 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 RDH14Q9HBH5 336 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 MRGBPQ9NV56 204 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 FAM86C1Q9NVL1 165 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 CD84Q9UIB8 345 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 STON1Q9Y6Q2 735 aa15.12■□□□□ 0.01
COPS3-201ENST00000268717 CAPN14A8MX76 684 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 HGSO14964 777 aaPredicted RBP15.11■□□□□ 0.01
COPS3-201ENST00000268717 AP1G1O43747 822 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 SUPT7LO94864 414 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 TRIM16O95361 564 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 ADH1BP00325 375 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 FGF4P08620 206 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 T-ENOLP0DO92 83 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 CALB2P22676 271 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 CCR10P46092 362 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 DPTQ07507 201 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 CCINQ13939 588 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 LRRC32Q14392 662 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 ACOX1Q15067 660 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 TGFBIQ15582 683 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 PPP1R3AQ16821 1122 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 CDKL4Q5MAI5 379 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 SH2D4BQ5SQS7 431 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 PLEKHS1Q5SXH7 462 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 ANKS6Q68DC2 871 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 SBSNQ6UWP8 590 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 MAML2Q8IZL2 1156 aaPredicted RBP15.11■□□□□ 0.01
COPS3-201ENST00000268717 PDPRQ8NCN5 879 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 GLYATL1Q969I3 302 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 AP2M1Q96CW1 435 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 IER2Q9BTL4 223 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 FAM126AQ9BYI3 521 aaPredicted RBP15.11■□□□□ 0.01
COPS3-201ENST00000268717 RSPH9Q9H1X1 276 aaPredicted RBP15.11■□□□□ 0.01
COPS3-201ENST00000268717 LRMDAQ9H2I8 198 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 TCF7L2Q9NQB0 619 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 SPATA6Q9NWH7 488 aaPredicted RBP15.11■□□□□ 0.01
COPS3-201ENST00000268717 CACNA2D2Q9NY47 1150 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 TRIM33Q9UPN9 1127 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 OARD1Q9Y530 152 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 TNPO3Q9Y5L0 923 aaKnown RBP15.11■□□□□ 0.01
COPS3-201ENST00000268717 PLXNA2O75051 1894 aa15.11■□□□□ 0.01
COPS3-201ENST00000268717 SLC22A2O15244 555 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 NUAK1O60285 661 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 SNX2O60749 519 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 DIAPH2O60879 1101 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 RNASEH1O60930 286 aaKnown RBP15.1■□□□□ 0.01
COPS3-201ENST00000268717 FTH1P02794 183 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 MSH3P20585 1137 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 AOAHP28039 575 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 AKT1P31749 480 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 KIR2DL1P43626 348 aaPredicted RBP15.1■□□□□ 0.01
COPS3-201ENST00000268717 GALK1P51570 392 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 INHBCP55103 352 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 LCP2Q13094 533 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 MTAPQ13126 283 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 POM121L1PQ3SYA9 428 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 TMEM196Q5HYL7 178 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 NEK10Q6ZWH5 1172 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 ACAD11Q709F0 780 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 PHYKPLQ8IUZ5 450 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 HOMEZQ8IX15 550 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 CHCHD4Q8N4Q1 142 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 ZNF513Q8N8E2 541 aaPredicted RBP15.1■□□□□ 0.01
COPS3-201ENST00000268717 EXT2Q93063 718 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 PTCD3Q96EY7 689 aaKnown RBP15.1■□□□□ 0.01
COPS3-201ENST00000268717 NSL1Q96IY1 281 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 PHOX2BQ99453 314 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 CCDC106Q9BWC9 280 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 FBRSL1Q9HCM7 1045 aaKnown RBP15.1■□□□□ 0.01
COPS3-201ENST00000268717 CDYLQ9Y232 598 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 PLXNB3Q9ULL4 1909 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 FADS2P1A8MWK0 482 aa15.1■□□□□ 0.01
COPS3-201ENST00000268717 RAD51BO15315 384 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms