RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 WNT9AO14904 365 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 PIP5K1BO14986 540 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 FFAR2O15552 330 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 TSPAN19P0C672 248 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 BUD31P41223 144 aaPredicted RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 C21orf59P57076 290 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 NAPRTQ6XQN6 538 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 PIGWQ7Z7B1 504 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 LUZP2Q86TE4 346 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 OR8H2Q8N162 312 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 DPEP2Q9H4A9 486 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 INTS7Q9NVH2 962 aaKnown RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 IKZF3Q9UKT9 509 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 PCDHGA11Q9Y5H2 935 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 COLEC10Q9Y6Z7 277 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 SLC28A2O43868 658 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 GJB5O95377 273 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 IDH3AP50213 366 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 C2orf80Q0P641 193 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 FGD2Q7Z6J4 655 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 TAF8Q7Z7C8 310 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 LPGAT1Q92604 370 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 ZNF514Q96K75 400 aaPredicted RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 NUSAP1Q9BXS6 441 aaKnown RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 C6orf62Q9GZU0 229 aaPredicted RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 PAIP1Q9H074 479 aaKnown RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 ELAC1Q9H777 363 aaKnown RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 SEMA3GQ9NS98 782 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 SLC2A6Q9UGQ3 507 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 TIPRLO75663 272 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 PGM3O95394 542 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 CCDC159P0C7I6 412 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 TYRP14679 529 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 BMP7P18075 431 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 AQP1P29972 269 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 MAPK10P53779 464 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 SERINC3Q13530 473 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 PLEKHG4Q58EX7 1191 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 LDLRAP1Q5SW96 308 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 UBXN11Q5T124 520 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 BROXQ5VW32 411 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 TMEM130Q8N3G9 435 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 TRMT61BQ9BVS5 477 aaKnown RBP15.22■□□□□ 0.03
TIMP3-201ENST00000266085 FAM72CH0Y354 149 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 MTX2O75431 263 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 DDX6P26196 483 aaKnown RBP eCLIP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 XIAPP98170 497 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 SPIBQ01892 262 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 FAM72AQ5TYM5 149 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 FAM72DQ6L9T8 149 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 ERICH5Q6P6B1 374 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 GPRIN1Q7Z2K8 1008 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 RALGPS2Q86X27 583 aaPredicted RBP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 FAM72BQ86X60 149 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 MPP4Q96JB8 637 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 FNDC11Q9BVV2 318 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 TRIT1Q9H3H1 467 aaKnown RBP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 EXD2Q9NVH0 621 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 COCHO43405 550 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 PRPS2P11908 318 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 PRDX6P30041 224 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 SMYD5Q6GMV2 418 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 GPR135Q8IZ08 494 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 POMGNT2Q8NAT1 580 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 MCCC1Q96RQ3 725 aaPredicted RBP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 OSBPL10Q9BXB5 764 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 TDRD1Q9BXT4 1180 aaKnown RBP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 S100A14Q9HCY8 104 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 RBM47A0AV96 593 aaKnown RBP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 TIE1P35590 1138 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 TMED10P49755 219 aaKnown RBP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 NR1H2P55055 460 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 IRF9Q00978 393 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 ANGPT1Q15389 498 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 HID1Q8IV36 788 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 DCAF4L2Q8NA75 395 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 ADCY4Q8NFM4 1077 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 OR2T34Q8NGX1 318 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 OR2T3Q8NH03 318 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 SNRNP27Q8WVK2 155 aaKnown RBP15.21■□□□□ 0.03
TIMP3-201ENST00000266085 PNPLA3Q9NST1 481 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 U3KQV3 271 aa15.21■□□□□ 0.03
TIMP3-201ENST00000266085 FAM25AB3EWG3 89 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 FAM25CB3EWG5 89 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 FAM25GB3EWG6 89 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 PITPNM1O00562 1244 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 SLC18A1P54219 525 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 GPX6P59796 221 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 LAPTM5Q13571 262 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 UBXN2BQ14CS0 331 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 ATP13A5Q4VNC0 1218 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 RTP2Q5QGT7 225 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 SPPL2CQ8IUH8 684 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 DEPDC7Q96QD5 511 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 TMEM248Q9NWD8 314 aa15.21■□□□□ 0.02
TIMP3-201ENST00000266085 A0A0D9SEW6 157 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 PNMA8CA0A1B0GUJ8 204 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ZNF487B1APH4 448 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 CHRNGP07510 517 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 RPL5P46777 297 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms