RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 UBXN2BQ14CS0 331 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 DLG2Q15700 870 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 RELL1Q8IUW5 271 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 ZNF101Q8IZC7 436 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 HEXDCQ8WVB3 486 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 C16orf58Q96GQ5 468 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 VCPIP1Q96JH7 1222 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 LRTM1Q9HBL6 345 aa11.27□□□□□ -0.61
PTPN4-201ENST00000263708 POLR3BQ9NW08 1133 aaPredicted RBP11.27□□□□□ -0.61
PTPN4-201ENST00000263708 DISP1Q96F81 1524 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 A0A0J9YYE9 177 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 EIF1AYO14602 144 aaKnown RBP11.26□□□□□ -0.61
PTPN4-201ENST00000263708 FSBPO95073 299 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 IFNA21P01568 189 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 ZNF3P17036 446 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 AFF1P51825 1210 aaKnown RBP11.26□□□□□ -0.61
PTPN4-201ENST00000263708 ALG10BQ5I7T1 473 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 TTI2Q6NXR4 508 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 ANKRD7Q92527 254 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 SRMSQ9H3Y6 488 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 CLTCL1P53675 1640 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 F8VP50 259 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 GADD45AP24522 165 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 SLC1A2P43004 574 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 C1orf94Q6P1W5 598 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 USP30Q70CQ3 517 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 CEP76Q8TAP6 659 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 UFD1Q92890 307 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 UCK2Q9BZX2 261 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 MAGEL2Q9UJ55 1249 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 GLYATL1P3A0A0U1RQE8 302 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 PGLSO95336 258 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 RHEBQ15382 184 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 TTMPQ5BVD1 217 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 DAGLBQ8NCG7 672 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 OR2T12Q8NG77 320 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 CCDC107Q8WV48 283 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 DPYSL5Q9BPU6 564 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 WFS1O76024 890 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 VEGFAP15692 232 aaPredicted RBP11.26□□□□□ -0.61
PTPN4-201ENST00000263708 RAB12Q6IQ22 244 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 NT5C1B-RDH14C9J2C7 533 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 SMIM10L2AP0DMW4 78 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 SMIM10L2BP0DMW5 78 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 RIOX2Q8IUF8 465 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 ZNF527Q8NB42 609 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 FARSAQ9Y285 508 aaKnown RBP11.26□□□□□ -0.61
PTPN4-201ENST00000263708 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 KCNJ13O60928 360 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 CALCAP01258 141 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 UAP1L1Q3KQV9 507 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 RC3H2Q9HBD1 1191 aaKnown RBP11.26□□□□□ -0.61
PTPN4-201ENST00000263708 A8MUA0 341 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 B8ZZF3 427 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 C9J4A7 227 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 NR0B1P51843 470 aaKnown RBP11.26□□□□□ -0.61
PTPN4-201ENST00000263708 TMEM164Q5U3C3 297 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 TBC1D21Q8IYX1 336 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 ZBTB2Q8N680 514 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 SUN5Q8TC36 379 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 GPR151Q8TDV0 419 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 BAP1Q92560 729 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 NSMCE3Q96MG7 304 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 TRIM64CA6NLI5 447 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 OR2AG2A6NM03 316 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 CAPN14A8MX76 684 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 CD47Q08722 323 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 RHBDF2Q6PJF5 856 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 GK5Q6ZS86 529 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 ZSCAN1Q8NBB4 408 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 IL1RAPQ9NPH3 570 aa11.26□□□□□ -0.61
PTPN4-201ENST00000263708 LYARQ9NX58 379 aaKnown RBP11.26□□□□□ -0.61
PTPN4-201ENST00000263708 C13orf42A0A1B0GVH6 325 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 PAPSS1O43252 624 aaPredicted RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 HCKP08631 526 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 C3orf33Q6P1S2 294 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 SPPL2CQ8IUH8 684 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 HES2Q9Y543 173 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 CPS1P31327 1500 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 SAGE2PA6NJ88 616 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 CD300LFQ8TDQ1 290 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 AASSQ9UDR5 926 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 MAN2B2Q9Y2E5 1009 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 PCDHGA10Q9Y5H3 936 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ELOA3DA6NLF2 546 aaPredicted RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 APOL3O95236 402 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ELOA3BQ3SY89 546 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 TMEM145Q8NBT3 493 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 FAM13CQ8NE31 585 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ELOA3Q8NG57 546 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 PHB2Q99623 299 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 GTPBP2Q9BX10 602 aaKnown RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 IRF2BPLQ9H1B7 796 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 ALG2Q9H553 416 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 CENPMQ9NSP4 180 aa11.25□□□□□ -0.61
PTPN4-201ENST00000263708 IFT80Q9P2H3 777 aaPredicted RBP11.25□□□□□ -0.61
PTPN4-201ENST00000263708 FUT4P22083 530 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms