RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 ZRANB3Q5FWF4 1079 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 C6orf136Q5SQH8 315 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 LETMD1Q6P1Q0 360 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 IL27RAQ6UWB1 636 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 SLC39A5Q6ZMH5 540 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 Q6ZSR9 355 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 GLT6D1Q7Z4J2 308 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 ZNF598Q86UK7 904 aaKnown RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 MON1AQ86VX9 555 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 LGI2Q8N0V4 545 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 TMEM199Q8N511 208 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 LPCAT1Q8NF37 534 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 BRSK1Q8TDC3 778 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 GIPC2Q8TF65 315 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 ZNF599Q96NL3 588 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 PPP1R2P1Q96PQ5 205 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 TFB2MQ9H5Q4 396 aaKnown RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 NTN4Q9HB63 628 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 TLR9Q9NR96 1032 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 PCTPQ9UKL6 214 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 POLR3HQ9Y535 204 aaPredicted RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 U3KQV3 271 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 NUP214P35658 2090 aaPredicted RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 TANC1Q9C0D5 1861 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 C1orf232A0A0U1RR37 186 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 M0QZQ0 153 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 CYP11A1P05108 521 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 GPIP06744 558 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 MLLT10P55197 1068 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 TPD52P55327 224 aaPredicted RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 ERVPABLB-1P60509 514 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 BCL2A1Q16548 175 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 NADSYN1Q6IA69 706 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 ENPP6Q6UWR7 440 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 SLC24A5Q71RS6 500 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 TAS2R42Q7RTR8 314 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 SNX29P2Q8IUI4 249 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 SFRP1Q8N474 314 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 PACRGLQ8N7B6 248 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 CLHC1Q8NHS4 586 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 SEPT5Q99719 369 aaPredicted RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 TRIM62Q9BVG3 475 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 TRIM54Q9BYV2 358 aa9.92□□□□□ -0.82
LIG3-201ENST00000262327 WARS2Q9UGM6 360 aaKnown RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 LEF1Q9UJU2 399 aaPredicted RBP9.92□□□□□ -0.82
LIG3-201ENST00000262327 PTGES3LE9PB15 166 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 XYLBO75191 536 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 OXSR1O95747 527 aaPredicted RBP9.91□□□□□ -0.82
LIG3-201ENST00000262327 CAPN1P07384 714 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 SERPINF2P08697 491 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 BMXP51813 675 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 C21orf59P57076 290 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 RPS24P62847 133 aaKnown RBP9.91□□□□□ -0.82
LIG3-201ENST00000262327 CAMK2BQ13554 666 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 LAPTM4AQ15012 233 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 NR6A1Q15406 480 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 MEP1AQ16819 746 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 METTL6Q8TCB7 284 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 C1orf74Q96LT6 269 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 FAM32AQ9Y421 112 aaKnown RBP9.91□□□□□ -0.82
LIG3-201ENST00000262327 N6AMT1Q9Y5N5 214 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 AXIN1O15169 862 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 DFNA5O60443 496 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 ESRRBO95718 433 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 CHEK2O96017 543 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 MYCP01106 439 aaPredicted RBP9.91□□□□□ -0.82
LIG3-201ENST00000262327 FGF1P05230 155 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 AGXTP21549 392 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 HMOX2P30519 316 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 PBX3P40426 434 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 SLC26A3P40879 764 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 GDF5P43026 501 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 ARPC4P59998 168 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 RELAQ04206 551 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 DMPKQ09013 629 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 PTGR1Q14914 329 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 MAPRE1Q15691 268 aaKnown RBP9.91□□□□□ -0.82
LIG3-201ENST00000262327 ATP6AP1LQ52LC2 224 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 PDCD4Q53EL6 469 aaKnown RBP9.91□□□□□ -0.82
LIG3-201ENST00000262327 ANKRD26P1Q6NSI1 321 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 GALNT18Q6P9A2 607 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 LINGO4Q6UY18 593 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 GPRIN3Q6ZVF9 776 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 PIWIL3Q7Z3Z3 882 aaKnown RBP9.91□□□□□ -0.82
LIG3-201ENST00000262327 MILR1Q7Z6M3 343 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 GPSM1Q86YR5 675 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 LRRC49Q8IUZ0 686 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 TBC1D21Q8IYX1 336 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 ALDH16A1Q8IZ83 802 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 SLC15A4Q8N697 577 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 TEX26Q8N6G2 289 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 ATP6V0D2Q8N8Y2 350 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 RHEBL1Q8TAI7 183 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 ITFG1Q8TB96 612 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 SNX19Q92543 992 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 BHMTQ93088 406 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 SUSD3Q96L08 255 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 UROC1Q96N76 676 aa9.91□□□□□ -0.82
LIG3-201ENST00000262327 C17orf80Q9BSJ5 609 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms