RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 C16orf59Q7L2K0 433 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 EPHX4Q8IUS5 362 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 PDZD8Q8NEN9 1154 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 FAM110BQ8TC76 370 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 FBXL20Q96IG2 436 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 SLC45A3Q96JT2 553 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 MUC3BQ9H195 1237 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 CWH43Q9H720 699 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 CCM2LQ9NUG4 571 aaPredicted RBP22.3■■□□□ 1.16
MCF2L-201ENST00000261963 A0A1B0GVM2 712 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 FXYD1O00168 92 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 BTN3A1O00481 513 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 NME4O00746 187 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 KLK8O60259 260 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 NIPSNAP2O75323 286 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 SEC24AO95486 1093 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 CLIC3O95833 236 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 HGFP14210 728 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 NFKBIAP25963 317 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 MC4RP32245 332 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 MAPK10P53779 464 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 RNF219Q5W0B1 726 aaPredicted RBP22.3■■□□□ 1.16
MCF2L-201ENST00000261963 SIDT2Q8NBJ9 832 aaKnown RBP22.3■■□□□ 1.16
MCF2L-201ENST00000261963 OVCA2Q8WZ82 227 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 VN1R3Q9BXE9 311 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 RNF38Q9H0F5 515 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 IL1RL2Q9HB29 575 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 SLC52A3Q9NQ40 469 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 ZNF225Q9UK10 706 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 AURKCQ9UQB9 309 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 TIMM22Q9Y584 194 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 NCF1BA6NI72 391 aaPredicted RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 NCF1CA8MVU1 366 aaPredicted RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 ANKRD66B4E2M5 251 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 AOC2O75106 756 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 MATN4O95460 622 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 NCF1P14598 390 aaPredicted RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 PKMP14618 531 aaKnown RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 YBX1P67809 324 aaKnown RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 OXA1LQ15070 435 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 LINGO4Q6UY18 593 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 NKAPQ8N5F7 415 aaKnown RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 OR13F1Q8NGS4 319 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 C1QTNF3Q9BXJ4 246 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 MRPL9Q9BYD2 267 aaKnown RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 BPIFA1Q9NP55 256 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 ABCD2Q9UBJ2 740 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 NDUFAF1Q9Y375 327 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 TANC1Q9C0D5 1861 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 EFEMP2O95967 443 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 IRF1P10914 325 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 ATP6V1B2P21281 511 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 MATN1P21941 496 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 TUFMP49411 452 aaKnown RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 HK3P52790 923 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 ADGRF1Q5T601 910 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 TTC30BQ8N4P2 665 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 EFHBQ8N7U6 833 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 RAET1EQ8TD07 263 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 CEP295NLQ96MC4 621 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 YTHDF1Q9BYJ9 559 aaKnown RBP22.29■■□□□ 1.16
MCF2L-201ENST00000261963 NANOGQ9H9S0 305 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 PKD2L2Q9NZM6 624 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 PCTPQ9UKL6 214 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 CPQQ9Y646 472 aa22.29■■□□□ 1.16
MCF2L-201ENST00000261963 SYCE1LA8MT33 242 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 PABPC1P11940 636 aaKnown RBP22.28■■□□□ 1.16
MCF2L-201ENST00000261963 CES1P23141 567 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 DIO3P55073 304 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 UGT3A1Q6NUS8 523 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 NANOGNBQ7Z5D8 188 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 SYVN1Q86TM6 617 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 OFCC1Q8IZS5 231 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 TMCO5AQ8N6Q1 288 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 CD200R1Q8TD46 325 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 CGREF1Q99674 301 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 MROQ9BYG7 248 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 FAM149AA5PLN7 773 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 STX16O14662 325 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 INHAP05111 366 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 PRR35P0CG20 571 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 C7P10643 843 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 CHRM3P20309 590 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 FAM126BQ8IXS8 530 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 PNPT1Q8TCS8 783 aaKnown RBP22.28■■□□□ 1.16
MCF2L-201ENST00000261963 EFHD2Q96C19 240 aaPredicted RBP22.28■■□□□ 1.16
MCF2L-201ENST00000261963 AGPAT4Q9NRZ5 378 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 FNDC3AQ9Y2H6 1198 aaKnown RBP22.28■■□□□ 1.16
MCF2L-201ENST00000261963 ASB1Q9Y576 335 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 GPR45Q9Y5Y3 372 aa22.28■■□□□ 1.16
MCF2L-201ENST00000261963 GBF1Q92538 1859 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 VPS26AO75436 327 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 IL10P22301 178 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 FASP25445 335 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 BFSP2Q13515 415 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 ATP6AP1Q15904 470 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 EEF1AKMT1Q8WVE0 214 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 ZUFSPQ96AP4 578 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 ALPK1Q96QP1 1244 aa22.27■■□□□ 1.16
MCF2L-201ENST00000261963 HOPXQ9BPY8 73 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms