RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 GFM1Q96RP9 751 aaKnown RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 NPLQ9BXD5 320 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 NEK6Q9HC98 313 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 MIEF1Q9NQG6 463 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 GIT1Q9Y2X7 761 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 PTGDR2Q9Y5Y4 395 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 INMTO95050 263 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 IL6P05231 212 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 LPOP22079 712 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 PSMA1P25786 263 aaKnown RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 THPOP40225 353 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 GPR15P49685 360 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 SCNN1GP51170 649 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 HIST2H2ACQ16777 129 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-201ENST00000261646 SDHAF4Q5VUM1 108 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 HIST2H2AA3Q6FI13 130 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 PAQR3Q6TCH7 311 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 HFE2Q6ZVN8 426 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 C1GALT1C1Q96EU7 318 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 NUMBLQ9Y6R0 609 aa16.02■□□□□ 0.16
SREBF1-201ENST00000261646 A0A1B0GW55 424 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 PCP4L1A6NKN8 68 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 DUX4L2P0CJ85 424 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 DUX4L3P0CJ86 424 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 DUX4L4P0CJ87 422 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 DUX4L5P0CJ88 424 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 DUX4L6P0CJ89 424 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 DUX4L7P0CJ90 424 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 MYCLP1P12525 358 aaPredicted RBP16.02■□□□□ 0.15
SREBF1-201ENST00000261646 MC4RP32245 332 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 SLC15A1P46059 708 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 BLVRAP53004 296 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 RPS7P62081 194 aaKnown RBP16.02■□□□□ 0.15
SREBF1-201ENST00000261646 C16orf62Q7Z3J2 963 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 TAC4Q86UU9 113 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 COLGALT2Q8IYK4 626 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 GPR65Q8IYL9 337 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 CARNMT1Q8N4J0 409 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 IRGQQ8WZA9 623 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 TMEM209Q96SK2 561 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 TRPC4Q9UBN4 977 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 DUX4Q9UBX2 424 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 SNX6Q9UNH7 406 aa16.02■□□□□ 0.15
SREBF1-201ENST00000261646 PRR23AA6NEV1 266 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 C4BPBP20851 252 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 DAOAP59103 153 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 PITX1P78337 314 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-201ENST00000261646 CYP4F8P98187 520 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 GRB7Q14451 532 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 CEP97Q8IW35 865 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 HOMEZQ8IX15 550 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 GALNT12Q8IXK2 581 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 LRRC17Q8N6Y2 441 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 HDAC2Q92769 488 aaKnown RBP16.01■□□□□ 0.15
SREBF1-201ENST00000261646 TMCO6Q96DC7 493 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 FCRL5Q96RD9 977 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 SLC39A8Q9C0K1 460 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 PCDHB3Q9Y5E6 796 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 NME4O00746 187 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 ALDH1A2O94788 518 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 FABP3P05413 133 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 HNF4AP41235 474 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 VEPH1Q14D04 833 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 NANOGP8Q6NSW7 305 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 ANKRD13BQ86YJ7 626 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 TP53INP2Q8IXH6 220 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 UXS1Q8NBZ7 420 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 NCSTNQ92542 709 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 NELL1Q92832 810 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 LHPPQ9H008 270 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 FBXO44Q9H4M3 255 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 NANOGQ9H9S0 305 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 KLHL1Q9NR64 748 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 SIPA1L3O60292 1781 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-201ENST00000261646 PLK4O00444 970 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 AP2A2O94973 939 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 DIRAS1O95057 198 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 POU2F1P14859 743 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 GTF2E2P29084 291 aaKnown RBP16.01■□□□□ 0.15
SREBF1-201ENST00000261646 SLC39A12Q504Y0 691 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 ATAD3BQ5T9A4 648 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 C9orf131Q5VYM1 1079 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 CPNE9Q8IYJ1 553 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 AURKBQ96GD4 344 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-201ENST00000261646 HNRNPABQ99729 332 aaKnown RBP16.01■□□□□ 0.15
SREBF1-201ENST00000261646 H0YAE9 185 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 TSPAN1O60635 241 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 NNMTP40261 264 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 KIR3DL1P43629 444 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 ALDH9A1P49189 494 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 USP43Q70EL4 1123 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 CNIH3Q8TBE1 160 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 GMLQ99445 158 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 CNPPD1Q9BV87 410 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 ZNF510Q9Y2H8 683 aa16.01■□□□□ 0.15
SREBF1-201ENST00000261646 SCAMP3O14828 347 aaKnown RBP16■□□□□ 0.15
SREBF1-201ENST00000261646 TIE1P35590 1138 aa16■□□□□ 0.15
SREBF1-201ENST00000261646 GSTM5P46439 218 aa16■□□□□ 0.15
SREBF1-201ENST00000261646 NUDT6P53370 316 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms