RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NSUN3Q9H649 340 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MRPL17Q9NRX2 175 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PDE10AQ9Y233 779 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 GPR45Q9Y5Y3 372 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PLECQ15149 4684 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 A0A087WV48 116 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 UBXN8O00124 270 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 GIPC1O14908 333 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 OPHN1O60890 802 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 BGNP21810 368 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PTGER1P34995 402 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 YARSP54577 528 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PABPC1LQ4VXU2 614 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SEL1L2Q5TEA6 688 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SCYL2Q6P3W7 929 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TMEM199Q8N511 208 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 FEM1CQ96JP0 617 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SIGLEC11Q96RL6 698 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 NPAS2Q99743 824 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MAGEH1Q9H213 219 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SNX25Q9H3E2 840 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MAGEE1Q9HCI5 957 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SAYSD1Q9NPB0 183 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PARD6AQ9NPB6 346 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TBC1D29Q9UFV1 150 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF223Q9UK11 482 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 CDH7Q9ULB5 785 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 NTNG1Q9Y2I2 539 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 NBASA2RRP1 2371 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PATE3B3GLJ2 98 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MID1O15344 667 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SPOPO43791 374 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 LYPD3O95274 346 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 CBX6O95503 412 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 IBSPP21815 317 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 HRH2P25021 359 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ACRV1P26436 265 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SSTR4P31391 388 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 IDH3AP50213 366 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 AP1B1Q10567 949 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MTAPQ13126 283 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ARL13AQ5H913 290 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SFRP1Q8N474 314 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 OXR1Q8N573 874 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ANKS4BQ8N8V4 417 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 DDHD1Q8NEL9 900 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 CCDC26Q8TAB7 109 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 L3HYPDHQ96EM0 354 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC6A20Q9NP91 592 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ARMCX1Q9P291 453 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 RIMKLBQ9ULI2 386 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PCDHB9Q9Y5E1 797 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TENM2Q9NT68 2774 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PRKRAO75569 313 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ECEL1O95672 775 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 CEACAM7Q14002 265 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 MYLK3Q32MK0 819 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ARSIQ5FYB1 569 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 CLEC6AQ6EIG7 209 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ARHGEF18Q6ZSZ5 1173 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 OR2A1Q8NGT9 310 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 P3H4Q92791 437 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SGF29Q96ES7 293 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ZC3H10Q96K80 434 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 C19orf43Q9BQ61 176 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 MS4A8Q9BY19 250 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 EPHX3Q9H6B9 360 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PRMT8Q9NR22 394 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SPATS2LQ9NUQ6 558 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 CRYL1Q9Y2S2 319 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 TYW5A2RUC4 315 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ECI2O75521 394 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 IPO13O94829 963 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 EPHA2P29317 976 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 FRKP42685 505 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 MRPL19P49406 292 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 MNAT1P51948 309 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PTPN5P54829 565 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 DPTQ07507 201 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 NFE2Q16621 373 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 RARS2Q5T160 578 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 BRAT1Q6PJG6 821 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 UBL4BQ8N7F7 174 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 OR2AP1Q8NGE2 309 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 RLN3Q8WXF3 142 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 HAUS8Q9BT25 410 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 CADM1Q9BY67 442 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 MTIF3Q9H2K0 278 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SIRT3Q9NTG7 399 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 KNTC1P50748 2209 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 EFNB1P98172 346 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 UBAP2LQ14157 1087 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 HIF1AQ16665 826 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 MUM1Q2TAK8 710 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 LACTB2Q53H82 288 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 DNAJC21Q5F1R6 531 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PRAMEF17Q5VTA0 474 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF517Q6ZMY9 492 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SUMF1Q8NBK3 374 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PDPRQ8NCN5 879 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms