RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 UBXN10Q96LJ8 280 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 CEP19Q96LK0 163 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TEX37Q96LM6 180 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 APOLD1Q96LR9 279 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 MYRFLQ96LU7 910 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PPP3R2Q96LZ3 170 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TOR3AQ9H497 397 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 MRM3Q9HC36 420 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 CD320Q9NPF0 282 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SDR39U1Q9NRG7 319 aaPredicted RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 INTS10Q9NVR2 710 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 OSER1Q9NX31 292 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TRPM5Q9NZQ8 1165 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 DNMT3LQ9UJW3 386 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.68□□□□□ -1.66
USP44-201ENST00000258499 PDE10AQ9Y233 779 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 FCF1Q9Y324 198 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 PCDHB7Q9Y5E2 793 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TNPO3Q9Y5L0 923 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 A0A0U1RQF3 1178 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 A0A1B0GTL3 188 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 FAM234BA2RU67 622 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 LCHNA4D1U4 455 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 HHLA1C9JL84 531 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 hCG_2039718K7EN88 272 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 CBFA2T3O75081 653 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 XYLBO75191 536 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PAPSS2O95340 614 aaPredicted RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 PRAMEF1O95521 474 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 FADS2O95864 444 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 CKMP06732 381 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 RAP2AP10114 183 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 OGNP20774 298 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 FDXRP22570 491 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SERPINB1P30740 379 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 FMO3P31513 532 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 HTR7P34969 479 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TRPC1P48995 793 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PLD1Q13393 1074 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SERINC3Q13530 473 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SEMA3AQ14563 771 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 VEPH1Q14D04 833 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TRIP4Q15650 581 aaPredicted RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 NHSL2Q5HYW2 709 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SPANXN4Q5MJ08 99 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 GPR180Q86V85 440 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PIANPQ8IYJ0 282 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 UMODL1-AS1Q8N2C9 162 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 LIX1Q8N485 282 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TMEM199Q8N511 208 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 MINDY1Q8N5J2 469 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PACRGLQ8N7B6 248 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 OR4F6Q8NGB9 312 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PSMA8Q8TAA3 256 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PYCR2Q96C36 320 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SUSD3Q96L08 255 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 GPATCH1Q9BRR8 931 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 RMND5AQ9H871 391 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 HMG20AQ9NP66 347 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 ABCB10Q9NRK6 738 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SH3BP4Q9P0V3 963 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 GTF2IRD1Q9UHL9 959 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 CNOT11Q9UKZ1 510 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 SPO11Q9Y5K1 396 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 GMPPBQ9Y5P6 360 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 RFXANKO14593 260 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 MUSKO15146 869 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 MGEA5O60502 916 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 RASAL1O95294 804 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 BMP10O95393 424 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 ANGPTL1O95841 491 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 UMPSP11172 480 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 JAK1P23458 1154 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 ITPKAP23677 461 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 CORO1AP31146 461 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 GNPDA1P46926 289 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 RPL34P49207 117 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 NEK2P51955 445 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 CASP9P55211 416 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 EEFSECP57772 596 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 APOFQ13790 326 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 KCNA10Q16322 511 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TBC1D25Q3MII6 688 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 LRRC73Q5JTD7 316 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SPRYD7Q5W111 196 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SMYD5Q6GMV2 418 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PRSS55Q6UWB4 352 aaPredicted RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 TMEM132CQ8N3T6 1108 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SMYD1Q8NB12 490 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 FUBP1Q96AE4 644 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 ITCHQ96J02 903 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 NODALQ96S42 347 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SLC30A3Q99726 388 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 LRTM1Q9HBL6 345 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 AGPAT4Q9NRZ5 378 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 AIG1Q9NVV5 245 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 TMEM248Q9NWD8 314 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 AASSQ9UDR5 926 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 PADI4Q9UM07 663 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms