RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MTHFRP42898 656 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 KLHL12Q53G59 568 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 PPP2R2DQ66LE6 453 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 C2orf73Q8N5S3 287 aaPredicted RBP18.73■□□□□ 0.59
PTPRE-201ENST00000254667 S100ZQ8WXG8 99 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 EXOSC8Q96B26 276 aaKnown RBP18.73■□□□□ 0.59
PTPRE-201ENST00000254667 EQTNQ9NQ60 294 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 AGRPO00253 132 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 METTL18O95568 372 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 CTSKP43235 329 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 GPM6BQ13491 265 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 PDGFRLQ15198 375 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 HEATR4Q86WZ0 1026 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 MIPEPQ99797 713 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 PIGVQ9NUD9 493 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 CMTM6Q9NX76 183 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 MAP10Q9P2G4 905 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 ACRP10323 421 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 CAPGP40121 348 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 IL12RB1P42701 662 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 RABGGTBP53611 331 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 ZNF155Q12901 538 aaPredicted RBP18.73■□□□□ 0.59
PTPRE-201ENST00000254667 FBXL22Q6P050 247 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 ZNF730Q6ZMV8 503 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 OAFQ86UD1 273 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 HPS6Q86YV9 775 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.73■□□□□ 0.59
PTPRE-201ENST00000254667 ZNF781Q8N8C0 355 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 SLC35F5Q8WV83 523 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 CERS4Q9HA82 394 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 TXNRD2Q9NNW7 524 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 FADS3Q9Y5Q0 445 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 COMMD3-BMI1R4GMX3 469 aa18.73■□□□□ 0.59
PTPRE-201ENST00000254667 A0A1W2PRU2 124 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 WNT9AO14904 365 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 RPTNQ6XPR3 784 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 LPGAT1Q92604 370 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 LPIN3Q9BQK8 851 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 ALG2Q9H553 416 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 RHPN2P1A8MT19 583 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 TMEM63AO94886 807 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 TOP3BO95985 862 aaKnown RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 ZNF33AQ06730 810 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 PRKD1Q15139 912 aaPredicted RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 RNASE11Q8TAA1 199 aaKnown RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 LMLNQ96KR4 655 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 NR2E1Q9Y466 385 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 SLC26A3P40879 764 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 TRAP1Q12931 704 aaKnown RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 GDPD4Q6W3E5 623 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 AMZ2Q86W34 360 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 LIX1Q8N485 282 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 RNF39Q9H2S5 420 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 RSL24D1Q9UHA3 163 aaKnown RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 IQCF5A8MTL0 148 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 H0YC42 278 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 PIP5K1BO14986 540 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 TSC22D2O75157 780 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 PFKMP08237 780 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 PLEKHG4Q58EX7 1191 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 TCEAL5Q5H9L2 206 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 BRAT1Q6PJG6 821 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 FAM43BQ6ZT52 329 aaPredicted RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 UBASH3BQ8TF42 649 aa18.72■□□□□ 0.59
PTPRE-201ENST00000254667 LENG8Q96PV6 779 aaPredicted RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 PPIEQ9UNP9 301 aaKnown RBP18.72■□□□□ 0.59
PTPRE-201ENST00000254667 CCDC162PA2VCL2 907 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 HLA-DQB2P05538 268 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 INCA1Q0VD86 236 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 RALGPS2Q86X27 583 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 VANGL1Q8TAA9 524 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 NUS1Q96E22 293 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 ZDHHC3Q9NYG2 299 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 PDP1Q9P0J1 537 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 STYXL1Q9Y6J8 313 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 STON1Q9Y6Q2 735 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 K7EPI3 171 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 ADAMDEC1O15204 470 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 PRMT3O60678 531 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 SHOX2O60902 331 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 IL1R2P27930 398 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 SEC13P55735 322 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 DLG1Q12959 904 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 RALGDSQ12967 914 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 ZSWIM7Q19AV6 140 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 TTLQ8NG68 377 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 DNASE1L2Q92874 299 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 TWNKQ96RR1 684 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 ADAMTS3O15072 1205 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 PGM3O95394 542 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 IGFBP5P24593 272 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 PTX3P26022 381 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 VARSP26640 1264 aaKnown RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 AQP1P29972 269 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 IDH3AP50213 366 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 CHST15Q7LFX5 561 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 AHI1Q8N157 1196 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 OR10H5Q8NGA6 315 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 SLC38A4Q969I6 547 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms