RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 LILRA3Q8N6C8 439 aaPredicted RBP22.49■■□□□ 1.19
LSM4-201ENST00000252816 GPR150Q8NGU9 434 aa22.49■■□□□ 1.19
LSM4-201ENST00000252816 PDLIM2Q96JY6 352 aa22.49■■□□□ 1.19
LSM4-201ENST00000252816 PBKQ96KB5 322 aa22.49■■□□□ 1.19
LSM4-201ENST00000252816 RANBP9Q96S59 729 aa22.49■■□□□ 1.19
LSM4-201ENST00000252816 EPB41L1Q9H4G0 881 aa22.49■■□□□ 1.19
LSM4-201ENST00000252816 EIF2B3Q9NR50 452 aaKnown RBP22.49■■□□□ 1.19
LSM4-201ENST00000252816 SMARCAL1Q9NZC9 954 aa22.49■■□□□ 1.19
LSM4-201ENST00000252816 LOC400499M0QZD8 3231 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 A8MU76 341 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 C9orf172C9J069 976 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 KLK10O43240 276 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 PRAMEF10O60809 474 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 UBXN7O94888 489 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 ADRA1DP25100 572 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 FOXN2P32314 431 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 BASP1P80723 227 aaKnown RBP22.48■■□□□ 1.19
LSM4-201ENST00000252816 TSTD2Q5T7W7 516 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 TTC27Q6P3X3 843 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 C4orf22Q6V702 233 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 ARHGAP22Q7Z5H3 698 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 AGBL5Q8NDL9 886 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 SPDYE1Q8NFV5 336 aaPredicted RBP22.48■■□□□ 1.19
LSM4-201ENST00000252816 COG1Q8WTW3 980 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 PMEPA1Q969W9 287 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 AP1M1Q9BXS5 423 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 DPH1Q9BZG8 443 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 WWP1Q9H0M0 922 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 FOXJ2Q9P0K8 574 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 ACSL6Q9UKU0 697 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 TTC7AQ9ULT0 858 aaPredicted RBP22.48■■□□□ 1.19
LSM4-201ENST00000252816 TCAF1Q9Y4C2 921 aa22.48■■□□□ 1.19
LSM4-201ENST00000252816 CFAP20Q9Y6A4 193 aaKnown RBP22.48■■□□□ 1.19
LSM4-201ENST00000252816 CSTF2P33240 577 aaKnown RBP eCLIP22.47■■□□□ 1.19
LSM4-201ENST00000252816 GFERP55789 205 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 CLN3Q13286 438 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 TRIP13Q15645 432 aaPredicted RBP22.47■■□□□ 1.19
LSM4-201ENST00000252816 RBM12BQ8IXT5 1001 aaKnown RBP22.47■■□□□ 1.19
LSM4-201ENST00000252816 CFAP206Q8IYR0 622 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 CLDN19Q8N6F1 224 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 HDAC10Q969S8 669 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 INSM2Q96T92 566 aaPredicted RBP22.47■■□□□ 1.19
LSM4-201ENST00000252816 OCIAD1Q9NX40 245 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 KLHL3Q9UH77 587 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 ACSL5Q9ULC5 683 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 RIMKLBQ9ULI2 386 aa22.47■■□□□ 1.19
LSM4-201ENST00000252816 MN1Q10571 1320 aaPredicted RBP22.47■■□□□ 1.19
LSM4-201ENST00000252816 KLHL33A6NCF5 533 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 USP27XA6NNY8 438 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 POLBP06746 335 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 MTHFD1P11586 935 aaKnown RBP22.46■■□□□ 1.19
LSM4-201ENST00000252816 AMD1P17707 334 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 SESN2P58004 480 aaPredicted RBP22.46■■□□□ 1.19
LSM4-201ENST00000252816 ACVR1Q04771 509 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 LAMB3Q13751 1172 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 ZNF658BQ4V348 819 aaPredicted RBP22.46■■□□□ 1.19
LSM4-201ENST00000252816 DUS1LQ6P1R4 473 aaKnown RBP22.46■■□□□ 1.19
LSM4-201ENST00000252816 PLXDC1Q8IUK5 500 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 HM13Q8TCT9 377 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 JPH3Q8WXH2 748 aaPredicted RBP22.46■■□□□ 1.19
LSM4-201ENST00000252816 RSC1A1Q92681 617 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 MAGOHBQ96A72 148 aaKnown RBP22.46■■□□□ 1.19
LSM4-201ENST00000252816 RMDN2Q96LZ7 410 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 OSBPL9Q96SU4 736 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 PRORYQ9H606 182 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 IMP3Q9NV31 184 aaKnown RBP22.46■■□□□ 1.19
LSM4-201ENST00000252816 SSUH2Q9Y2M2 353 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 PRSS21Q9Y6M0 314 aa22.46■■□□□ 1.19
LSM4-201ENST00000252816 TCRBV7S3A2A0A539 114 aa22.45■■□□□ 1.18
LSM4-201ENST00000252816 GOT2P00505 430 aaKnown RBP22.45■■□□□ 1.18
LSM4-201ENST00000252816 C9P02748 559 aa22.45■■□□□ 1.18
LSM4-201ENST00000252816 VPS41P49754 854 aa22.45■■□□□ 1.18
LSM4-201ENST00000252816 CRADDP78560 199 aa22.45■■□□□ 1.18
LSM4-201ENST00000252816 BMPERQ8N8U9 685 aa22.45■■□□□ 1.18
LSM4-201ENST00000252816 C12orf66Q96MD2 445 aa22.45■■□□□ 1.18
LSM4-201ENST00000252816 CCM2Q9BSQ5 444 aa22.45■■□□□ 1.18
LSM4-201ENST00000252816 MGAQ8IWI9 3026 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 C17orf113A0A1B0GUU1 675 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 EFCAB7A8K855 629 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 KIF5CO60282 957 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 CAPZBP47756 277 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 LEPRP48357 1165 aaKnown RBP22.44■■□□□ 1.18
LSM4-201ENST00000252816 TGIF1Q15583 401 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 CYP1B1Q16678 543 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 CAPRIN2Q6IMN6 1127 aaKnown RBP22.44■■□□□ 1.18
LSM4-201ENST00000252816 AFTPHQ6ULP2 937 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 IGSF10Q6WRI0 2623 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 ZNF534Q76KX8 674 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 NLRP9Q7RTR0 991 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 ZFAND4Q86XD8 727 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 FAM129CQ86XR2 697 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 PPHLN1Q8NEY8 458 aaKnown RBP22.44■■□□□ 1.18
LSM4-201ENST00000252816 ANP32BQ92688 251 aaKnown RBP22.44■■□□□ 1.18
LSM4-201ENST00000252816 ART4Q93070 314 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 C9orf72Q96LT7 481 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 TGM7Q96PF1 710 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 TAAR9Q96RI9 348 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 B3GNT4Q9C0J1 378 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 COG4Q9H9E3 785 aa22.44■■□□□ 1.18
LSM4-201ENST00000252816 CHRAC1Q9NRG0 131 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms