RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 PRR23AA6NEV1 266 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 TBC1D3LB9A6J9 549 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 STX16-NPEPL1H3BU86 382 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 STX16O14662 325 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 PLRG1O43660 514 aaKnown RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 TBC1D3HP0C7X1 549 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 MPSTP25325 297 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 PRLHRP49683 370 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 ALDH18A1P54886 795 aaKnown RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 GALNT1Q10472 559 aaPredicted RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 TBC1D3GQ6DHY5 549 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 TBC1D3CQ6IPX1 549 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 PNCKQ6P2M8 343 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 KIAA1324Q6UXG2 1013 aaKnown RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 FRMD7Q6ZUT3 714 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 USP30Q70CQ3 517 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 TBC1D3Q8IZP1 549 aaPredicted RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 ZNF514Q96K75 400 aaPredicted RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 SHCBP1LQ9BZQ2 653 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 ABCF3Q9NUQ8 709 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 HEY2Q9UBP5 337 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 VTI1BQ9UEU0 232 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 FZD4Q9ULV1 537 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 MMP17Q9ULZ9 603 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 DUSP12Q9UNI6 340 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 APOBEC2Q9Y235 224 aaKnown RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 PLXNA2O75051 1894 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 CKAP5Q14008 2032 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 VEGFDO43915 354 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 MPC1LP0DKB6 136 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 EEF1DP29692 281 aaKnown RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 CCR10P46092 362 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 UNC50Q53HI1 259 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 SEL1L3Q68CR1 1132 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 ANKS6Q68DC2 871 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 ADAMTSL4Q6UY14 1074 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 CYHR1Q6ZMK1 362 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 PELI3Q8N2H9 469 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 BEND7Q8N7W2 519 aaPredicted RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 CCT6BQ92526 530 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 TMEM159Q96B96 161 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 LENG8Q96PV6 779 aaPredicted RBP18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 TRIM54Q9BYV2 358 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 OR2AG1Q9H205 316 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 PREBQ9HCU5 417 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 DNAJC28Q9NX36 388 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 OARD1Q9Y530 152 aa18.41■□□□□ 0.54
TNFSF9-201ENST00000245817 COL4A2P08572 1712 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 ATXN2Q99700 1313 aaKnown RBP18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 TCRBV21S2A2A0A5A6 115 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 C19orf67A6NJJ6 358 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 KLK8O60259 260 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 NUAK1O60285 661 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 VCLP18206 1134 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 CTSCP53634 463 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 AGERQ15109 404 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 WSCD2Q2TBF2 565 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 SH2D4BQ5SQS7 431 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 ATG14Q6ZNE5 492 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 ADGRG6Q86SQ4 1221 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 TRIM74Q86UV6 250 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 TRAPPC5Q8IUR0 188 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 LSMEM2Q8N112 164 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 MRGPRX1Q96LB2 322 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 EGFL8Q99944 293 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 GSTO2Q9H4Y5 243 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 ZDHHC2Q9UIJ5 367 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 MBD1Q9UIS9 605 aaPredicted RBP18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 HAO1Q9UJM8 370 aa18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 MRPS17Q9Y2R5 130 aaKnown RBP18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 TNPO3Q9Y5L0 923 aaKnown RBP18.4■□□□□ 0.54
TNFSF9-201ENST00000245817 F5P12259 2224 aa18.39■□□□□ 0.54
TNFSF9-201ENST00000245817 PLXNB3Q9ULL4 1909 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 A0A1W2PQU0 124 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 FFAR2O15552 330 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 SGTAO43765 313 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 RNGTTO60942 597 aaKnown RBP18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 SIX3O95343 332 aaPredicted RBP18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 PAK4O96013 591 aaPredicted RBP18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 C8GP07360 202 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 ADPRHP54922 357 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 BCL7AQ4VC05 210 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 TJAP1Q5JTD0 557 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 NEK5Q6P3R8 708 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 SBSNQ6UWP8 590 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 NEK10Q6ZWH5 1172 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 MTDHQ86UE4 582 aaKnown RBP18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 CUZD1Q86UP6 607 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 PLA2G15Q8NCC3 412 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 FAM131CQ96AQ9 280 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 FAR2Q96K12 515 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 COG4Q9H9E3 785 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 POLMQ9NP87 494 aaPredicted RBP18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 FAM8A1Q9UBU6 413 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 ZFP69BQ9UJL9 534 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 CA14Q9ULX7 337 aa18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 ZFR2Q9UPR6 939 aaKnown RBP18.39■□□□□ 0.53
TNFSF9-201ENST00000245817 HDAC3O15379 428 aa18.38■□□□□ 0.53
TNFSF9-201ENST00000245817 DIAPH2O60879 1101 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms