RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TNFAIP8O95379 198 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 SMIM18P0DKX4 95 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 UGT1A6P19224 532 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 UGT1A1P22309 533 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 UGT1A4P22310 534 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 CD70P32970 193 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 UGT1A3P35503 534 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 UGT1A5P35504 534 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 EEFSECP57772 596 aaKnown RBP15.93■□□□□ 0.14
UBE3D-201ENST00000237186 TXNL4AP83876 142 aaKnown RBP15.93■□□□□ 0.14
UBE3D-201ENST00000237186 TRAF3Q13114 568 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 PRKG2Q13237 762 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 NFYCQ13952 458 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 CAPRIN1Q14444 709 aaKnown RBP15.93■□□□□ 0.14
UBE3D-201ENST00000237186 CHRNA6Q15825 494 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 FAM117BQ6P1L5 589 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 TMCO2Q7Z6W1 182 aaPredicted RBP15.93■□□□□ 0.14
UBE3D-201ENST00000237186 ZFAND4Q86XD8 727 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 NXPE1Q8N323 547 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 ZBTB2Q8N680 514 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 FNDC5Q8NAU1 212 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 OR4F6Q8NGB9 312 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 LKAAEAR1Q8TD35 194 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 UBTD2Q8WUN7 234 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 VPS33AQ96AX1 596 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 SCRN2Q96FV2 425 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 SLC45A3Q96JT2 553 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 CDK15Q96Q40 435 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 C17orf80Q9BSJ5 609 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 SPATA16Q9BXB7 569 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 ZBP1Q9H171 429 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 SUN2Q9UH99 717 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 HS3ST2Q9Y278 367 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 SNX13Q9Y5W8 968 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 GBF1Q92538 1859 aa15.93■□□□□ 0.14
UBE3D-201ENST00000237186 SMIM31A0A1B0GVY4 71 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 DHRS12A0PJE2 317 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 ZNF839A8K0R7 811 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 LSM1O15116 133 aaKnown RBP15.92■□□□□ 0.14
UBE3D-201ENST00000237186 EFCAB14O75071 495 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CSPG5O95196 566 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CNPP09543 421 aaKnown RBP15.92■□□□□ 0.14
UBE3D-201ENST00000237186 SPATA31D3P0C874 917 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CTSAP10619 480 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 SRCP12931 536 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 IL12AP29459 219 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 GKP32189 559 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CCNHP51946 323 aaPredicted RBP15.92■□□□□ 0.14
UBE3D-201ENST00000237186 SNRPD1P62314 119 aaKnown RBP15.92■□□□□ 0.14
UBE3D-201ENST00000237186 YBX1P67809 324 aaKnown RBP15.92■□□□□ 0.14
UBE3D-201ENST00000237186 MTX3Q5HYI7 312 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 C6orf52Q5T4I8 152 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 SULT1C3Q6IMI6 304 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 TPGS1Q6ZTW0 290 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 SPATA31D4Q6ZUB0 917 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 TPRG1Q6ZUI0 275 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 ZSWIM9Q86XI8 627 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 HS6ST3Q8IZP7 471 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CLDN19Q8N6F1 224 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 PACRGLQ8N7B6 248 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CD244Q9BZW8 370 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 SEMA6AQ9H2E6 1030 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 IPPKQ9H8X2 491 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 ELOVL2Q9NXB9 296 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CRLS1Q9UJA2 301 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 PADI4Q9UM07 663 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 CCL27Q9Y4X3 112 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 PLXNA4Q9HCM2 1894 aa15.92■□□□□ 0.14
UBE3D-201ENST00000237186 TRAV19A0A0A6YYK7 116 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 ANKRD28O15084 1053 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 GPIP06744 558 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 ENO2P09104 434 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-201ENST00000237186 CBSLP0DN79 551 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 IL10P22301 178 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 CBSP35520 551 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 NSG1P42857 185 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 GSK3BP49841 420 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 HTR6P50406 440 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 MYBPC1Q00872 1141 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 MYLK3Q32MK0 819 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 C18orf21Q32NC0 220 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-201ENST00000237186 CDKL4Q5MAI5 379 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 CRTC1Q6UUV9 634 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 IL27RAQ6UWB1 636 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 MILR1Q7Z6M3 343 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 GALNT13Q8IUC8 556 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 CHERPQ8IWX8 916 aaKnown RBP15.91■□□□□ 0.14
UBE3D-201ENST00000237186 NCSTNQ92542 709 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 CNBD2Q96M20 576 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 MCCC1Q96RQ3 725 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-201ENST00000237186 SLC29A1Q99808 456 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 CPEB1Q9BZB8 566 aaKnown RBP15.91■□□□□ 0.14
UBE3D-201ENST00000237186 TNKS2Q9H2K2 1166 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 ALG2Q9H553 416 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 NSUN3Q9H649 340 aaKnown RBP15.91■□□□□ 0.14
UBE3D-201ENST00000237186 LEFTY2O00292 366 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 EIF3FO00303 357 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-201ENST00000237186 ARPC2O15144 300 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 BAIAP3O94812 1187 aa15.91■□□□□ 0.14
UBE3D-201ENST00000237186 TRIM16O95361 564 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms