RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ZNRF3Q9ULT6 936 aa8.27□□□□□ -1.09
SPARC-201ENST00000231061 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.09
SPARC-201ENST00000231061 SORCS3Q9UPU3 1222 aa8.27□□□□□ -1.09
SPARC-201ENST00000231061 ZNF541Q9H0D2 1346 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 LOXHD1Q8IVV2 1947 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 PIAS1O75925 651 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CD19P15391 556 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 DDCP20711 480 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 VHLP40337 213 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 MEOX2P50222 304 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 PRRX1P54821 245 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 C1QBPQ07021 282 aaKnown RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 FOXO1Q12778 655 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TOP3AQ13472 1001 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 SCARA3Q6AZY7 606 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CGB2Q6NT52 195 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CFAP77Q6ZQR2 320 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 C15orf39Q6ZRI6 1047 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 ECHDC2Q86YB7 292 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 BRI3BPQ8WY22 251 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 ADIPOR1Q96A54 375 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CSPG4P5Q96PW8 444 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 WDR77Q9BQA1 342 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 IFT27Q9BW83 186 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TTLL2Q9BWV7 592 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 MAGEE1Q9HCI5 957 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SLCO1B3Q9NPD5 702 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SLC35D1Q9NTN3 355 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SLC38A7Q9NVC3 462 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SMPD3Q9NY59 655 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 FZD1Q9UP38 647 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 WBP11Q9Y2W2 641 aaKnown RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 NPFFR2Q9Y5X5 522 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 BCLAF3A2AJT9 711 aaKnown RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 FAM172BPA6NC97 362 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 ERVH48-1M5A8F1 160 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TSPAN3O60637 253 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 RSL1D1O76021 490 aaKnown RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 VAMP5O95183 116 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TGM6O95932 706 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 PGK2P07205 417 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 KLRC2P26717 231 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CD40LGP29965 261 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 BMPR1AP36894 532 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SLC1A3P43003 542 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 HMGCS2P54868 508 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 RAD51Q06609 339 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CXCL9Q07325 125 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 PTP4A2Q12974 167 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SELENBP1Q13228 472 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 ACER2Q5QJU3 275 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 NOTUMQ6P988 496 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CENPUQ71F23 418 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 GDPD3Q7L5L3 318 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 PHF13Q86YI8 300 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 CMTM5Q96DZ9 223 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 ZNF764Q96H86 408 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 LGMNQ99538 433 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CGRRF1Q99675 332 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 C6orf62Q9GZU0 229 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 ASCC2Q9H1I8 757 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 ZNF302Q9NR11 478 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 A0A1W2PN81 502 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 DPYSL4O14531 572 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 LY86O95711 162 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SUPT20HL2P0C7V6 817 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 RD3LP0DJH9 198 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 GLRA2P23416 452 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 RRM2P31350 389 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 CHRNA7P36544 502 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TALDO1P37837 337 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 C21orf59P57076 290 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 PRKAA1Q13131 559 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TNFAIP1Q13829 316 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TFDP1Q14186 410 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 GPR68Q15743 365 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 GALNTL6Q49A17 601 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 RARS2Q5T160 578 aaKnown RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 TXNRD3NBQ6F5E7 133 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 TRABD2AQ86V40 505 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 FAM169BQ8N8A8 192 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 ATG16L2Q8NAA4 619 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 AGBL3Q8NEM8 1001 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 KHSRPQ92945 711 aaKnown RBP eCLIP8.26□□□□□ -1.09
SPARC-201ENST00000231061 C19orf60Q96EN9 201 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 BBS4Q96RK4 519 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 MRPL37Q9BZE1 423 aaKnown RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 HAPLN2Q9GZV7 340 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 SAE1Q9UBE0 346 aaPredicted RBP8.26□□□□□ -1.09
SPARC-201ENST00000231061 ZNHIT2Q9UHR6 403 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 COPS3Q9UNS2 423 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 KLK4Q9Y5K2 254 aa8.26□□□□□ -1.09
SPARC-201ENST00000231061 A4D1N5 150 aa8.25□□□□□ -1.09
SPARC-201ENST00000231061 RNF103O00237 685 aa8.25□□□□□ -1.09
SPARC-201ENST00000231061 WRBO00258 174 aa8.25□□□□□ -1.09
SPARC-201ENST00000231061 TCAPO15273 167 aa8.25□□□□□ -1.09
SPARC-201ENST00000231061 GMFGO60234 142 aa8.25□□□□□ -1.09
SPARC-201ENST00000231061 WFS1O76024 890 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms