RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 SLC39A8Q9C0K1 460 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 TSR3Q9UJK0 312 aaKnown RBP14.05□□□□□ -0.16
SHPK-201ENST00000225519 CAB39Q9Y376 341 aaPredicted RBP14.05□□□□□ -0.16
SHPK-201ENST00000225519 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 MATN3O15232 486 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 PCMT1P22061 227 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 IGFBP5P24593 272 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 MZF1P28698 734 aaPredicted RBP14.05□□□□□ -0.16
SHPK-201ENST00000225519 PRDX3P30048 256 aaKnown RBP14.05□□□□□ -0.16
SHPK-201ENST00000225519 ARSDP51689 593 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 ARHGDIAP52565 204 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 ERVK-8P63133 956 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 BNIPLQ7Z465 357 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 SIX5Q8N196 739 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 STAG3L4Q8TBR4 150 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 BCL7BQ9BQE9 202 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 PDGFCQ9NRA1 345 aa14.05□□□□□ -0.16
SHPK-201ENST00000225519 FAM92AA1XBS5 289 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 RPL34P49207 117 aaKnown RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 NRG1Q02297 640 aaPredicted RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 TTLL4Q14679 1199 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 SLC27A1Q6PCB7 646 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 RANBP10Q6VN20 620 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 FAM83FQ8NEG4 500 aaPredicted RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 OR5K1Q8NHB7 308 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 TRIB2Q92519 343 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 DMRTB1Q96MA1 342 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 TSGA13Q96PP4 275 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 UTS2RQ9UKP6 389 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 FNDC3AQ9Y2H6 1198 aaKnown RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 DERAQ9Y315 318 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 MED26O95402 600 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 S1PR4O95977 384 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 GGT1P19440 569 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 ZNF691Q5VV52 312 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 MRNIPQ6NTE8 343 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 TXNDC11Q6PKC3 985 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 AHSA2Q719I0 299 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 DET1Q7L5Y6 550 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 NECAB2Q7Z6G3 386 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 ELMOD1Q8N336 334 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 NUDT8Q8WV74 236 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 EMID1Q96A84 441 aaPredicted RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 CEP19Q96LK0 163 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 YME1L1Q96TA2 773 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 ZBED2Q9BTP6 218 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.04□□□□□ -0.16
SHPK-201ENST00000225519 TIMM13Q9Y5L4 95 aaPredicted RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 ENPP3O14638 875 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 KCNK2O95069 426 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 MSH3P20585 1137 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 EDNRBP24530 442 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 PNPLA4P41247 253 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 CDC20Q12834 499 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 CAMK2BQ13554 666 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 KRR1Q13601 381 aaKnown RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 ZNF181Q2M3W8 571 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 RFX4Q33E94 735 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 PLA2G4EQ3MJ16 856 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 SPATC1Q76KD6 591 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 CDK5RAP1Q96SZ6 601 aaKnown RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 CATSPERBQ9H7T0 1116 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 TRMT13Q9NUP7 481 aaKnown RBP14.04□□□□□ -0.16
SHPK-201ENST00000225519 KIF17Q9P2E2 1029 aa14.04□□□□□ -0.16
SHPK-201ENST00000225519 COL11A2P13942 1736 aaPredicted RBP14.03□□□□□ -0.16
SHPK-201ENST00000225519 AIREO43918 545 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 DDNO94850 711 aaPredicted RBP14.03□□□□□ -0.16
SHPK-201ENST00000225519 SPNP16150 400 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 BMPR1AP36894 532 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 PPP2R2BQ00005 443 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 NFKB2Q00653 900 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 KCTD2Q14681 263 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 TSNQ15631 228 aaKnown RBP14.03□□□□□ -0.16
SHPK-201ENST00000225519 GCNT7Q6ZNI0 430 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 TAC4Q86UU9 113 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 AADATQ8N5Z0 425 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 AMER2Q8N7J2 671 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 CD274Q9NZQ7 290 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 ZIM2Q9NZV7 527 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 PCDHGA10Q9Y5H3 936 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 TANC1Q9C0D5 1861 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 COL11A1P12107 1806 aaPredicted RBP14.03□□□□□ -0.16
SHPK-201ENST00000225519 LINC00854A0A1B0GVQ3 168 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 CENPXA8MT69 81 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 BTN3A1O00481 513 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 SLC7A4O43246 635 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 DFNA5O60443 496 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 OR4F21O95013 312 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 LGALS2P05162 132 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 ZNF37AP17032 561 aaPredicted RBP14.03□□□□□ -0.16
SHPK-201ENST00000225519 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
SHPK-201ENST00000225519 DCTP40126 519 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 SLC26A3P40879 764 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 ZFP69Q49AA0 526 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 C6orf136Q5SQH8 315 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 TPRG1LQ5T0D9 272 aa14.03□□□□□ -0.16
SHPK-201ENST00000225519 TIGD7Q6NT04 549 aaPredicted RBP14.03□□□□□ -0.16
SHPK-201ENST00000225519 IL27RAQ6UWB1 636 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms