RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 A0A0U1RQF3 1178 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 GABRDO14764 452 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 EIF2B2P49770 351 aaKnown RBP11.39□□□□□ -0.59
NOD1-201ENST00000222823 IDH3AP50213 366 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 SIM2Q14190 667 aaPredicted RBP11.39□□□□□ -0.59
NOD1-201ENST00000222823 ATXN7L2Q5T6C5 722 aaPredicted RBP11.39□□□□□ -0.59
NOD1-201ENST00000222823 SULT1C3Q6IMI6 304 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 GALNT18Q6P9A2 607 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 KLHL35Q6PF15 583 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 CPA6Q8N4T0 437 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 KREMEN2Q8NCW0 462 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 MOSPD2Q8NHP6 518 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 HERPUD2Q9BSE4 406 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 C8orf4Q9NR00 106 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 ZNF358Q9NW07 568 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 CIDEBQ9UHD4 219 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 MFHAS1Q9Y4C4 1052 aa11.39□□□□□ -0.59
NOD1-201ENST00000222823 TCRBV7S3A2A0A539 114 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 LRRC14BA6NHZ5 514 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 GTPBP1O00178 669 aaKnown RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 NRP1O14786 923 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PIP5K1BO14986 540 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 CTSKP43235 329 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 CRHR2Q13324 411 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 MED22Q15528 200 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PLA2G4EQ3MJ16 856 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PLEKHG4Q58EX7 1191 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 KLHL17Q6TDP4 642 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 TEX47Q8TBZ9 253 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 SLC35F5Q8WV83 523 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 DGCR14Q96DF8 476 aaKnown RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 SCLYQ96I15 445 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 KLHL32Q96NJ5 620 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PLEKHG4BQ96PX9 1271 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 CADM1Q9BY67 442 aaKnown RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 OSBPL2Q9H1P3 480 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 ALG2Q9H553 416 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 NEMP2A6NFY4 417 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 H0YC42 278 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 FAM163BP0C2L3 166 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PRDX6P30041 224 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 TOMM20Q15388 145 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 TAF1AQ15573 450 aaPredicted RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 KHDC1Q4VXA5 237 aaKnown RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 OR14C36Q8NHC7 312 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 WDR60Q8WVS4 1066 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 ACDQ96AP0 544 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 MUC13Q9H3R2 512 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 INTS7Q9NVH2 962 aaKnown RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 GON4LQ3T8J9 2241 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 TRBV23OR9-2A0A075B6M9 112 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 CCDC162PA2VCL2 907 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 FAM149AA5PLN7 773 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 MTHFRP42898 656 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PSMD8P48556 350 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 MLLT6P55198 1093 aaPredicted RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 SLC10A7Q0GE19 358 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PEX6Q13608 980 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 RGS21Q2M5E4 152 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 NCBP2-AS2Q69YL0 99 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 FBXL22Q6P050 247 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 PTCHD4Q6ZW05 846 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 ADGRG2Q8IZP9 1017 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 C11orf65Q8NCR3 313 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 ING5Q8WYH8 240 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 ZBED3Q96IU2 234 aaPredicted RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 PCYT2Q99447 389 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 XYLT2Q9H1B5 865 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 GKN1Q9NS71 199 aa11.38□□□□□ -0.59
NOD1-201ENST00000222823 INTS10Q9NVR2 710 aaKnown RBP11.38□□□□□ -0.59
NOD1-201ENST00000222823 SDK1Q7Z5N4 2213 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ENPP3O14638 875 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 FPGTO14772 594 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 LIN7AO14910 233 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 ZBTB11O95625 1053 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 RFTN1Q14699 578 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 PERM1Q5SV97 790 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ADGRF1Q5T601 910 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 MED27Q6P2C8 311 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 PAOXQ6QHF9 649 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 MPP5Q8N3R9 675 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 OR13C4Q8NGS5 318 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 RAD51AP1Q96B01 352 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ABCB10Q9NRK6 738 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 VIPP01282 170 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 GPIP06744 558 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 PRPS2P11908 318 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ETS2P15036 469 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TPP2P29144 1249 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 CAP1Q01518 475 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TAF13Q15543 124 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ZSWIM7Q19AV6 140 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 MSS51Q4VC12 460 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 KLHL12Q53G59 568 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 RALGPS1Q5JS13 557 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 SIDT2Q8NBJ9 832 aaKnown RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 ST13P5Q8NFI4 369 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 SUSD3Q96L08 255 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 S100A13Q99584 98 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms