RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 GNEQ9Y223 722 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 YIPF1Q9Y548 306 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 hCG_2039718K7EN88 272 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 TNFRSF21O75509 655 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 SAGP10523 405 aaPredicted RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 UROSP10746 265 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 CDH3P22223 829 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 CREB5Q02930 508 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 FAM174BQ3ZCQ3 159 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 MED27Q6P2C8 311 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.62■□□□□ 0.57
MBD3-201ENST00000156825 MOSPD2Q8NHP6 518 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 CLEC4AQ9UMR7 237 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 TCHHQ07283 1943 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 FGF19O95750 216 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 TFPIP10646 304 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 DRICH1Q6PGQ1 229 aaPredicted RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 TMEM110Q86TL2 294 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 CADM2Q8N3J6 435 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 TDRD1Q9BXT4 1180 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 TRIT1Q9H3H1 467 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 SAMD4AQ9UPU9 718 aaKnown RBP18.62■□□□□ 0.57
MBD3-201ENST00000156825 TLR6Q9Y2C9 796 aa18.62■□□□□ 0.57
MBD3-201ENST00000156825 ESR1P03372 595 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 PRKCHP24723 683 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 GGT5P36269 586 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 PTGER3P43115 390 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 MTPNP58546 118 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 PCDH1Q08174 1060 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 KHDC1Q4VXA5 237 aaKnown RBP18.61■□□□□ 0.57
MBD3-201ENST00000156825 FAM220AQ7Z4H9 259 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 CBR4Q8N4T8 237 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 NAT8LQ8N9F0 302 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 POC5Q8NA72 575 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 ZDHHC18Q9NUE0 388 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 A0A0U1RQF3 1178 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 TMCC2O75069 709 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 GATMP50440 423 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 MYBPC1Q00872 1141 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 ILF3Q12906 894 aaKnown RBP eCLIP18.61■□□□□ 0.572e-10■□□□□ 10.7
MBD3-201ENST00000156825 SLC5A9Q2M3M2 681 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 TCAIMQ8N3R3 496 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 CCDC28BQ9BUN5 200 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 EXD2Q9NVH0 621 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 CNTRLQ7Z7A1 2325 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 MCIDASD6RGH6 385 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 PIGRP01833 764 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 PPIBP23284 216 aaKnown RBP18.61■□□□□ 0.57
MBD3-201ENST00000156825 SH3D19Q5HYK7 790 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 FBXL18Q96ME1 805 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 CYP1B1Q16678 543 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 FAM81AQ8TBF8 368 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 LRTOMTQ8WZ04 291 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 TMEM109Q9BVC6 243 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 SEMA3GQ9NS98 782 aa18.61■□□□□ 0.57
MBD3-201ENST00000156825 OR5F1O95221 314 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 HMGCS1Q01581 520 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 PMEPA1Q969W9 287 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 KAT6AQ92794 2004 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 CDH5P33151 784 aaPredicted RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 TAF1AQ15573 450 aaPredicted RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 NDUFAF6Q330K2 333 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 SLC9B1Q4ZJI4 515 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 ZNF730Q6ZMV8 503 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 ZNF598Q86UK7 904 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 CMTM8Q8IZV2 173 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 PGAM4Q8N0Y7 254 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 HAPLN3Q96S86 360 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 BCL2L14Q9BZR8 327 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 ARVCFO00192 962 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 SLC20A2Q08357 652 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 ARSIQ5FYB1 569 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 ADGRF1Q5T601 910 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 GPR65Q8IYL9 337 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 RNASE11Q8TAA1 199 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 MATN4O95460 622 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 NR1D2Q14995 579 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 KIAA0930Q6ICG6 404 aaPredicted RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 TMEM214Q6NUQ4 689 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 MSANTD2Q6P1R3 559 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 CLDN19Q8N6F1 224 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 CADM1Q9BY67 442 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 SIX4Q9UIU6 781 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 CFAP20Q9Y6A4 193 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 WASF2Q9Y6W5 498 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 NSG1P42857 185 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 CLK3P49761 638 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 CDK9P50750 372 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 POU5F1Q01860 360 aaKnown RBP18.6■□□□□ 0.57
MBD3-201ENST00000156825 PIM3Q86V86 326 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 ZNF248Q8NDW4 579 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 PIK3C3Q8NEB9 887 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 C12orf66Q96MD2 445 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 FCRL5Q96RD9 977 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 KCTD3Q9Y597 815 aa18.6■□□□□ 0.57
MBD3-201ENST00000156825 ITM2AO43736 263 aa18.59■□□□□ 0.57
MBD3-201ENST00000156825 JAK1P23458 1154 aa18.59■□□□□ 0.57
MBD3-201ENST00000156825 PEX2P28328 305 aa18.59■□□□□ 0.57
MBD3-201ENST00000156825 KLHL35Q6PF15 583 aa18.59■□□□□ 0.57
MBD3-201ENST00000156825 LYSMD3Q7Z3D4 306 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms