RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CADM1Q9BY67 442 aaKnown RBP10.16□□□□□ -0.78
PHGDH-224ENST00000641711 C1orf21Q9H246 121 aa10.16□□□□□ -0.78
PHGDH-224ENST00000641711 POPDC3Q9HBV1 291 aa10.16□□□□□ -0.78
PHGDH-224ENST00000641711 NLE1Q9NVX2 485 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-224ENST00000641711 TAS2R1Q9NYW7 299 aa10.16□□□□□ -0.78
PHGDH-224ENST00000641711 MARCH4Q9P2E8 410 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-224ENST00000641711 CPSF2Q9P2I0 782 aaKnown RBP10.16□□□□□ -0.78
PHGDH-224ENST00000641711 VTI1BQ9UEU0 232 aa10.16□□□□□ -0.78
PHGDH-224ENST00000641711 SERGEFQ9UGK8 458 aa10.16□□□□□ -0.78
PHGDH-224ENST00000641711 MBD1Q9UIS9 605 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-224ENST00000641711 STK38LQ9Y2H1 464 aa10.16□□□□□ -0.78
PHGDH-224ENST00000641711 KCTD3Q9Y597 815 aa10.16□□□□□ -0.78
PHGDH-224ENST00000641711 PTPRZ1P23471 2315 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-224ENST00000641711 PLXNA2O75051 1894 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 METTL12A8MUP2 240 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 HDAC3O15379 428 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 CD3EAPO15446 510 aaKnown RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 GYG2O15488 501 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 MAGEC1O60732 1142 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 RNGTTO60942 597 aaKnown RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 PGLSO95336 258 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 PIGNO95427 931 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 GOT2P00505 430 aaKnown RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 LMNAP02545 664 aaKnown RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 CYP2A6P11509 494 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 ZNF30P17039 623 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 BCKDHBP21953 392 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 FDXRP22570 491 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 ACSL1P33121 698 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 MMP12P39900 470 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 RPL14P50914 215 aaKnown RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 NHLH1Q02575 133 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 TRAF2Q12933 501 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 GALNT3Q14435 633 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 ZNF460Q14592 562 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 ACAP2Q15057 778 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 AGERQ15109 404 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 TMEM52BQ4KMG9 183 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 DNAL1Q4LDG9 190 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 SETMARQ53H47 684 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 LYSMD4Q5XG99 296 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 KIAA0895LQ68EN5 471 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 KLC3Q6P597 504 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 AFTPHQ6ULP2 937 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 RINLQ6ZS11 566 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 SDCCAG8Q86SQ7 713 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 CAMK1DQ8IU85 385 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 KIRREL3Q8IZU9 778 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 LSMEM2Q8N112 164 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 TEX9Q8N6V9 391 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 PAF1Q8N7H5 531 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 SUMF1Q8NBK3 374 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 OR4L1Q8NH43 312 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 OR14C36Q8NHC7 312 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 BLOC1S5Q8TDH9 187 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 RLN3Q8WXF3 142 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 DNASE2BQ8WZ79 361 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 CDKN2AIPNLQ96HQ2 116 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 DNAJC1Q96KC8 554 aaKnown RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 CNDP1Q96KN2 507 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 LYSMD1Q96S90 227 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 TCF12Q99081 682 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 NDNQ99608 321 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 C19orf43Q9BQ61 176 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 GPR174Q9BXC1 333 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 C1QTNF7Q9BXJ2 289 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 COG4Q9H9E3 785 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 CATSPERZQ9NTU4 200 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 INTS10Q9NVR2 710 aaKnown RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 HACD3Q9P035 362 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 ARMCX1Q9P291 453 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 GMEB2Q9UKD1 530 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-224ENST00000641711 SPO11Q9Y5K1 396 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 RAI2Q9Y5P3 530 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 FADS3Q9Y5Q0 445 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 ARL5AQ9Y689 179 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 R4GN57 208 aa10.15□□□□□ -0.78
PHGDH-224ENST00000641711 DOCK9Q9BZ29 2069 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 CABIN1Q9Y6J0 2220 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 CAPN8A6NHC0 703 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 A8MUI8 341 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 MEI4A8MW99 385 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 PRR5-ARHGAP8B1AHC4 643 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 TOR1BO14657 336 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 SLC22A2O15244 555 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 ENO1P06733 434 aaKnown RBP10.14□□□□□ -0.79
PHGDH-224ENST00000641711 RETP07949 1114 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 TIMP2P16035 220 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 TFEBP19484 476 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 CD9P21926 228 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 MPSTP25325 297 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 CD27P26842 260 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 ADSLP30566 484 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-224ENST00000641711 GKP32189 559 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 ABL2P42684 1182 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 GLRBP48167 497 aa10.14□□□□□ -0.79
PHGDH-224ENST00000641711 MNAT1P51948 309 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms