RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 LEXMQ3ZCV2 418 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 FAM98BQ52LJ0 330 aaKnown RBP11.88□□□□□ -0.51
CAPN3-221ENST00000638141 SULT1C3Q6IMI6 304 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 CYHR1Q6ZMK1 362 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 C2orf69Q8N8R5 385 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 OR4M1Q8NGD0 313 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 PMEPA1Q969W9 287 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 AGAP2Q99490 1192 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 GTPBP2Q9BX10 602 aaKnown RBP11.88□□□□□ -0.51
CAPN3-221ENST00000638141 ITPAQ9BY32 194 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 MIR1-1HGQ9H1L0 117 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 POMKQ9H5K3 350 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 GBA2Q9HCG7 927 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-221ENST00000638141 RANGRFQ9HD47 186 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-221ENST00000638141 TMEM45AQ9NWC5 275 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 SNX6Q9UNH7 406 aa11.88□□□□□ -0.51
CAPN3-221ENST00000638141 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 OR5K4A6NMS3 321 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 M0QYV0 167 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 MEN1O00255 615 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 RGS10O43665 173 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 TLL1O43897 1013 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 CYP11A1P05108 521 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 FOSL1P15407 271 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 TIE1P35590 1138 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 MAP2K4P45985 399 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 MAPK12P53778 367 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 CDH13P55290 713 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 FKBP1AP62942 108 aaKnown RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 COL19A1Q14993 1142 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 EMC2Q15006 297 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 SH3PXD2AQ5TCZ1 1133 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 NCBP2-AS2Q69YL0 99 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 FAM183BPQ6ZVS7 135 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 SH3BP5LQ7L8J4 393 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 ZDHHC17Q8IUH5 632 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 PSTKQ8IV42 348 aaKnown RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 ST13P5Q8NFI4 369 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 IPCEF1Q8WWN9 437 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 DEDD2Q8WXF8 326 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 GPRASP2Q96D09 838 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 HEXIM2Q96MH2 286 aaKnown RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 PORCNQ9H237 461 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 SCPEP1Q9HB40 452 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 SDR39U1Q9NRG7 319 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 GPATCH2LQ9NWQ4 482 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 COL20A1Q9P218 1284 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 DICER1Q9UPY3 1922 aaKnown RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 AIREO43918 545 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 AP2A1O95782 977 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 F9P00740 461 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 MT-ND2P03891 347 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 HOXB6P17509 224 aaKnown RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 PIK3CBP42338 1070 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 RFX2P48378 723 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 LIMK1P53667 647 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 RAB10P61026 200 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 CAPRIN1Q14444 709 aaKnown RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 USP10Q14694 798 aaKnown RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 STK11Q15831 433 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 C9orf131Q5VYM1 1079 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 GLYATQ6IB77 296 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 OR6B2Q6IFH4 312 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 SCYL2Q6P3W7 929 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 SLC22A9Q8IVM8 553 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 AADATQ8N5Z0 425 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 NAT16Q8N8M0 369 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 ACVR1CQ8NER5 493 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 PPP1R13LQ8WUF5 828 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 TMEM176AQ96HP8 235 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 ZBTB45Q96K62 511 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 SEPHS2Q99611 448 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 ITM2CQ9NQX7 267 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
CAPN3-221ENST00000638141 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-221ENST00000638141 A0A1W2PP18 115 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 A8MV72 311 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 ATF4P18848 351 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 EFNA1P20827 205 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 ARL2P36404 184 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 SCNN1AP37088 669 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 MTHFRP42898 656 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 GLRBP48167 497 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 PPP3CCP48454 512 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 SOX10P56693 466 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CHRNB3Q05901 458 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 SLAMF1Q13291 335 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 RIN1Q13671 783 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 KEAP1Q14145 624 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 VPS26BQ4G0F5 336 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 ZNF782Q6ZMW2 699 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 UTS2BQ765I0 119 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms