RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ADAMTSL4Q6UY14 1074 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 NLRP8Q86W28 1048 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 NAGSQ8N159 534 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 PLD5Q8N7P1 536 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 OR4D9Q8NGE8 314 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 NUDT22Q9BRQ3 303 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 CDH19Q9H159 772 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 RCOR3Q9P2K3 495 aaPredicted RBP12.5□□□□□ -0.41
CTSD-208ENST00000636843 PCDHGA3Q9Y5H0 932 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 MYO18BQ8IUG5 2567 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 H7C0C1 242 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 CDH16O75309 829 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 PYGLP06737 847 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 ITGB6P18564 788 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 ATP5OP48047 213 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 POLD2P49005 469 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 NR2C2P49116 596 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 CSRP3P50461 194 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 GDF10P55107 478 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 ARL4CP56559 192 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 MAXP61244 160 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 XRCC4Q13426 336 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 HIF1AQ16665 826 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 TTC19Q6DKK2 380 aaPredicted RBP12.49□□□□□ -0.41
CTSD-208ENST00000636843 PPP1R21Q6ZMI0 780 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 ZNF765Q7L2R6 523 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 TEX26Q8N6G2 289 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 PQLC3Q8N755 202 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 NAT8LQ8N9F0 302 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 AGBL5Q8NDL9 886 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 RCBTB1Q8NDN9 531 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 PIH1D2Q8WWB5 315 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 CPT1BQ92523 772 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 RTP4Q96DX8 246 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 CCDC74BQ96LY2 380 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 PWWP2AQ96N64 755 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 OR2M4Q96R27 311 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 PAK5Q9P286 719 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 LGALS13Q9UHV8 139 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 PRDM4Q9UKN5 801 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 ST14Q9Y5Y6 855 aa12.49□□□□□ -0.41
CTSD-208ENST00000636843 IGHV1OR21-1A0A087WYE8 117 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 E7EVH7 732 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 PYCARD-AS1I3L0S3 204 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 PPM1DO15297 605 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 FAM87AP0C7U9 286 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 FGF3P11487 239 aaPredicted RBP12.48□□□□□ -0.41
CTSD-208ENST00000636843 ZNF30P17039 623 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 WT1P19544 449 aaPredicted RBP12.48□□□□□ -0.41
CTSD-208ENST00000636843 CES1P23141 567 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 CSTF2P33240 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTSD-208ENST00000636843 ACTR1BP42025 376 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 ACTR1AP61163 376 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 GPLD1P80108 840 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 LONRF1Q17RB8 773 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 DOK6Q6PKX4 331 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
CTSD-208ENST00000636843 FAM71DQ8N9W8 422 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
CTSD-208ENST00000636843 PATE1Q8WXA2 126 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 AP2M1Q96CW1 435 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 C9orf72Q96LT7 481 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 DDA1Q9BW61 102 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 ABCG8Q9H221 673 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 NT5MQ9NPB1 228 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 KCNK4Q9NYG8 393 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 IL17BQ9UHF5 180 aa12.48□□□□□ -0.41
CTSD-208ENST00000636843 E7ESA3 106 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 NDUFAB1O14561 156 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 FZD6O60353 706 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 SOD1P00441 154 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 THRAP10827 490 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 CTPS1P17812 591 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 PHBP35232 272 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 SLCO1A2P46721 670 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 IFI35P80217 286 aaPredicted RBP12.47□□□□□ -0.41
CTSD-208ENST00000636843 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
CTSD-208ENST00000636843 CBLBQ13191 982 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 LRP8Q14114 963 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 PYCR3Q53H96 274 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 NKAIN2Q5VXU1 208 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 LRRC66Q68CR7 880 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 ATG14Q6ZNE5 492 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 BZW1Q7L1Q6 419 aaKnown RBP12.47□□□□□ -0.41
CTSD-208ENST00000636843 ZC3H18Q86VM9 953 aaKnown RBP12.47□□□□□ -0.41
CTSD-208ENST00000636843 TDRPQ86YL5 185 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 RAVER1Q8IY67 606 aaKnown RBP12.47□□□□□ -0.41
CTSD-208ENST00000636843 NRSN1Q8IZ57 195 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 HTR3CQ8WXA8 447 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 NKD1Q969G9 470 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 SLC12A9Q9BXP2 914 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 ASPSCR1Q9BZE9 553 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 GEMIN8Q9NWZ8 242 aaKnown RBP12.47□□□□□ -0.41
CTSD-208ENST00000636843 TMEM98Q9Y2Y6 226 aa12.47□□□□□ -0.41
CTSD-208ENST00000636843 ACTL7BQ9Y614 415 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms