RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TLCD2A6NGC4 264 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 RAB40ALP0C0E4 278 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 PIRTP0C851 137 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 GSDMDP57764 484 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 DPYSL3Q14195 570 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 PLCL1Q15111 1095 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 KHDC1Q4VXA5 237 aaKnown RBP19.69■□□□□ 0.74
TARDBP-228ENST00000629725 ZRANB3Q5FWF4 1079 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 CCDC183Q5T5S1 534 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 IQCKQ8N0W5 287 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 TTC30BQ8N4P2 665 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 GPR150Q8NGU9 434 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 OR8K5Q8NH50 307 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 ZNF501Q96CX3 271 aaPredicted RBP19.69■□□□□ 0.74
TARDBP-228ENST00000629725 BTBD6Q96KE9 485 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 CD180Q99467 661 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 SMAD5Q99717 465 aaKnown RBP19.69■□□□□ 0.74
TARDBP-228ENST00000629725 ISCUQ9H1K1 167 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 MAGEE1Q9HCI5 957 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 AIPL1Q9NZN9 384 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 CHMP5Q9NZZ3 219 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 TCFL5Q9UL49 500 aa19.69■□□□□ 0.74
TARDBP-228ENST00000629725 MX2P20592 715 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 SSR1P43307 286 aaKnown RBP19.68■□□□□ 0.74
TARDBP-228ENST00000629725 VAV2P52735 878 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 RRADP55042 308 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 ITGA1P56199 1179 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 TMEM115Q12893 351 aaPredicted RBP19.68■□□□□ 0.74
TARDBP-228ENST00000629725 GTF2H3Q13889 308 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 GPR19Q15760 415 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 C1QL3Q5VWW1 255 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 SRRM1Q8IYB3 904 aaKnown RBP19.68■□□□□ 0.74
TARDBP-228ENST00000629725 TTC13Q8NBP0 860 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 CCNYQ8ND76 341 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 LRFN5Q96NI6 719 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 NLNQ9BYT8 704 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 GPR63Q9BZJ6 419 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 ASF1BQ9NVP2 202 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 IP6K2Q9UHH9 426 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 OTOGQ6ZRI0 2925 aa19.68■□□□□ 0.74
TARDBP-228ENST00000629725 PIKFYVEQ9Y2I7 2098 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 SPTBP11277 2137 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 FBN2P35556 2912 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 OR5K3A6NET4 321 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 MEN1O00255 615 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 KCNJ13O60928 360 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 BPIP17213 487 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 ELAVL4P26378 380 aaKnown RBP19.67■□□□□ 0.74
TARDBP-228ENST00000629725 PRKCIP41743 596 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 KLHL30Q0D2K2 578 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 RPE65Q16518 533 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 PLEKHN1Q494U1 663 aaPredicted RBP19.67■□□□□ 0.74
TARDBP-228ENST00000629725 TMTC4Q5T4D3 741 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 FAM69BQ5VUD6 431 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 LCN10Q6JVE6 187 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 DSELQ8IZU8 1212 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 GLIS1Q8NBF1 620 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 GDAP1Q8TB36 358 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 CPT1BQ92523 772 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 HDAC11Q96DB2 347 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 TTC25Q96NG3 672 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 VPS35Q96QK1 796 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 HRASLS2Q9NWW9 162 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 ANAPC7Q9UJX3 599 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 ZNF711Q9Y462 761 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 CSMD2Q7Z408 3487 aa19.67■□□□□ 0.74
TARDBP-228ENST00000629725 ANKUB1A6NFN9 424 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 KCNK1O00180 336 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 ZBTB11O95625 1053 aaPredicted RBP19.66■□□□□ 0.74
TARDBP-228ENST00000629725 ARSEP51690 589 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 GBE1Q04446 702 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 RAPSNQ13702 412 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 ELOAQ14241 798 aaKnown RBP19.66■□□□□ 0.74
TARDBP-228ENST00000629725 HADHQ16836 314 aaKnown RBP19.66■□□□□ 0.74
TARDBP-228ENST00000629725 PLEKHS1Q5SXH7 462 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 E4F1Q66K89 784 aaPredicted RBP19.66■□□□□ 0.74
TARDBP-228ENST00000629725 AMZ2Q86W34 360 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 CISD2Q8N5K1 135 aaKnown RBP19.66■□□□□ 0.74
TARDBP-228ENST00000629725 ZBTB2Q8N680 514 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 KCTD6Q8NC69 237 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 TRIB3Q96RU7 358 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 ZNF670Q9BS34 389 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 LATS2Q9NRM7 1088 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 C5AR2Q9P296 337 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 TMPRSS11EQ9UL52 423 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 PSMD13Q9UNM6 376 aa19.66■□□□□ 0.74
TARDBP-228ENST00000629725 APCP25054 2843 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 DMPKQ09013 629 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 ATP13A5Q4VNC0 1218 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 ATP13A4Q4VNC1 1196 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 PRAMEF17Q5VTA0 474 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 OOSP2Q86WS3 158 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 SLC34A3Q8N130 599 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 CNTD1Q8N815 330 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 BRSK1Q8TDC3 778 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 CLIP3Q96DZ5 547 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 SGSM3Q96HU1 749 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 PHF12Q96QT6 1004 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 HSD3B7Q9H2F3 369 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 FANCEQ9HB96 536 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms