RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 B3GNTL1Q67FW5 361 aaPredicted RBP13.55□□□□□ -0.24
SNX1-214ENST00000625244 ZNF324BQ6AW86 544 aaPredicted RBP13.55□□□□□ -0.24
SNX1-214ENST00000625244 FBXO38Q6PIJ6 1188 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 CEP97Q8IW35 865 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 SLC30A5Q8TAD4 765 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 CHTF18Q8WVB6 975 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 PPM1MQ96MI6 270 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 GBP5Q96PP8 586 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 MGME1Q9BQP7 344 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 ACTR5Q9H9F9 607 aaPredicted RBP13.55□□□□□ -0.24
SNX1-214ENST00000625244 MAN1B1Q9UKM7 699 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 WDR37Q9Y2I8 494 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 PADI2Q9Y2J8 665 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 ABCA4P78363 2273 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 A0A0J9YYE9 177 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 GTPBP10A4D1E9 387 aaKnown RBP13.54□□□□□ -0.24
SNX1-214ENST00000625244 BIN1O00499 593 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 FZD6O60353 706 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 ZBTB11O95625 1053 aaPredicted RBP13.54□□□□□ -0.24
SNX1-214ENST00000625244 TRBC1P01850 177 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 IGHEP01854 428 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
SNX1-214ENST00000625244 IL4RP24394 825 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 HTR7P34969 479 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 HSPA9P38646 679 aaKnown RBP13.54□□□□□ -0.24
SNX1-214ENST00000625244 PBX1P40424 430 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 HADHAP40939 763 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 ARCN1P48444 511 aaKnown RBP13.54□□□□□ -0.24
SNX1-214ENST00000625244 FOXL2P58012 376 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 PLCL1Q15111 1095 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 ASIC2Q16515 512 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 CA9Q16790 459 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 FCRL6Q6DN72 434 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 XKRXQ6PP77 449 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 CREBRFQ8IUR6 639 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 TMEM151BQ8IW70 566 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 GPR150Q8NGU9 434 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 OR1L3Q8NH93 324 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 ZNF599Q96NL3 588 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 CD180Q99467 661 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 REPIN1Q9BWE0 567 aaKnown RBP13.54□□□□□ -0.24
SNX1-214ENST00000625244 TLR10Q9BXR5 811 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 DTLQ9NZJ0 730 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 CACNA1CQ13936 2221 aa13.54□□□□□ -0.24
SNX1-214ENST00000625244 CSPG4Q6UVK1 2322 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 TMEM200CA6NKL6 621 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 C9J4A7 227 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 EEF2KO00418 725 aaKnown RBP13.53□□□□□ -0.24
SNX1-214ENST00000625244 CHUKO15111 745 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 CYP1A1P04798 512 aaPredicted RBP13.53□□□□□ -0.24
SNX1-214ENST00000625244 ERCC2P18074 760 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 CA7P43166 264 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 AIF1P55008 147 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 ADORA2A-AS1P86434 159 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 PTP4A2Q12974 167 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 TLR1Q15399 786 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 CCDC183Q5T5S1 534 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 AGAP9Q5VTM2 703 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 ZNF385CQ66K41 422 aaPredicted RBP13.53□□□□□ -0.24
SNX1-214ENST00000625244 PLEKHA7Q6IQ23 1121 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 MTFR2Q6P444 385 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 GFRALQ6UXV0 394 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 WASH2PQ6VEQ5 465 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 PPP1R32Q7Z5V6 425 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 ADGRG6Q86SQ4 1221 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 EPS8L1Q8TE68 723 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 COG1Q8WTW3 980 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 SLC20A1Q8WUM9 679 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 MTFMTQ96DP5 389 aaKnown RBP13.53□□□□□ -0.24
SNX1-214ENST00000625244 DHRS4Q9BTZ2 278 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 FAM83DQ9H4H8 585 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 SEMA3GQ9NS98 782 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 SOHLH2Q9NX45 425 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 SH3BGRL2Q9UJC5 107 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 BTRCQ9Y297 605 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 PTRH2Q9Y3E5 179 aaKnown RBP13.53□□□□□ -0.24
SNX1-214ENST00000625244 PCDHGB6Q9Y5F9 930 aa13.53□□□□□ -0.24
SNX1-214ENST00000625244 FAM221AA4D161 298 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 OR5K3A6NET4 321 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 ATMINO43313 823 aaPredicted RBP13.52□□□□□ -0.25
SNX1-214ENST00000625244 CYP2A7P20853 494 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 SPINT3P49223 89 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 ZNF143P52747 638 aaPredicted RBP13.52□□□□□ -0.25
SNX1-214ENST00000625244 IHHQ14623 411 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 PRKD1Q15139 912 aaPredicted RBP13.52□□□□□ -0.25
SNX1-214ENST00000625244 SKOR2Q2VWA4 1001 aaPredicted RBP13.52□□□□□ -0.25
SNX1-214ENST00000625244 MLIPQ5VWP3 458 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 KLHL35Q6PF15 583 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 TGIF2LYQ8IUE0 185 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 ZNF547Q8IVP9 402 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 NDUFAF2Q8N183 169 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 CATSPER1Q8NEC5 780 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 TAAR6Q96RI8 345 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 MDFIQ99750 246 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 SPOCK3Q9BQ16 436 aa13.52□□□□□ -0.25
SNX1-214ENST00000625244 SELENOOQ9BVL4 669 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms