RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PTGIRP43119 386 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CTSOP43234 321 aaPredicted RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 MAPK12P53778 367 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 LSM12Q3MHD2 195 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 PDE12Q6L8Q7 609 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 CASP12Q6UXS9 341 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 PLEKHM3Q6ZWE6 761 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ADAMTS15Q8TE58 950 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 KLHL25Q9H0H3 589 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 C3orf14Q9HBI5 128 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 DUSP12Q9UNI6 340 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ANKRD12Q6UB98 2062 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 MYO18AQ92614 2054 aaKnown RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 A0A1W2PP55 124 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 LRRC14BA6NHZ5 514 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ADAMTS4O75173 837 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 SLC22A3O75751 556 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 COX4I1P13073 169 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 LRRC32Q14392 662 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 SQLEQ14534 574 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 POMZP3Q6PJE2 187 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ANKLE1Q8NAG6 615 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TMEM145Q8NBT3 493 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 SEMA6AQ9H2E6 1030 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TMEM245Q9H330 911 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 RIBC2Q9H4K1 309 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 PDLIM7Q9NR12 457 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 SLC2A6Q9UGQ3 507 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CA14Q9ULX7 337 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CLOCKO15516 846 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 EDF1O60869 148 aaKnown RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 LEFTY1O75610 366 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 KRT75O95678 551 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 IDO1P14902 403 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 RYKP34925 604 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CLK3P49761 638 aaKnown RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 SLC7A2P52569 658 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ZNF132P52740 706 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 GALNT2Q10471 571 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 LMAN2Q12907 356 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 LCP2Q13094 533 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 GSTA3Q16772 222 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 MARCH8Q5T0T0 291 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 MED27Q6P2C8 311 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 IZUMO2Q6UXV1 221 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ALYREFQ86V81 257 aaKnown RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 LRRTM4Q86VH4 590 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 COMMD2Q86X83 199 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TMEM25Q86YD3 366 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 OR6Y1Q8NGX8 325 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 KBTBD7Q8WVZ9 684 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 PYDC1Q8WXC3 89 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TFGQ92734 400 aaPredicted RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 IGSF8Q969P0 613 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 HHIPL1Q96JK4 782 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TOX2Q96NM4 488 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CNPPD1Q9BV87 410 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 HCFC1R1Q9NWW0 138 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ZDHHC3Q9NYG2 299 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TMEM98Q9Y2Y6 226 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 EP300Q09472 2414 aaPredicted RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 A8MU76 341 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 PTGES3LE9PB15 166 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CNOT3O75175 753 aaKnown RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 HIST1H2ABP04908 130 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CREB1P16220 341 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 FGFR3P22607 806 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 SLC6A2P23975 617 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 S100A5P33763 92 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 SERPINB10P48595 397 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 NUP107P57740 925 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 USP46P62068 366 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 DSG1Q02413 1049 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CREB5Q02930 508 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 RING1Q06587 406 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ZNF549Q6P9A3 640 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TMEM154Q6P9G4 183 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ADGRD1Q6QNK2 874 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 B3GNT9Q6UX72 402 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 HIST3H2AQ7L7L0 130 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 KCT2Q8NC54 265 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 NELL1Q92832 810 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 HIST1H2ACQ93077 130 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 TOP1MTQ969P6 601 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 DPYSL5Q9BPU6 564 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 GRHL1Q9NZI5 618 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 ANAPC2Q9UJX6 822 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 CNOT6Q9ULM6 557 aaKnown RBP9.13□□□□□ -0.95
GGA3-223ENST00000621870 CYP8B1Q9UNU6 501 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 PIAS3Q9Y6X2 628 aa9.13□□□□□ -0.95
GGA3-223ENST00000621870 GABRDO14764 452 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SLC28A2O43868 658 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 PRAMEF11O60813 436 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 MASP1P48740 699 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 RUNX3Q13761 415 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 ACAP2Q15057 778 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 DHCR24Q15392 516 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 VWA5B1Q5TIE3 1220 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 AP1ARQ63HQ0 302 aa9.12□□□□□ -0.95
GGA3-223ENST00000621870 SPESP1Q6UW49 350 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms