RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 DCPSQ96C86 337 aaKnown RBP5.02□□□□□ -1.61
VPS29-212ENST00000621131 CALML4Q96GE6 196 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 HES6Q96HZ4 224 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 ZBED3Q96IU2 234 aaPredicted RBP5.02□□□□□ -1.61
VPS29-212ENST00000621131 AK8Q96MA6 479 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 ZNF385AQ96PM9 386 aaKnown RBP5.02□□□□□ -1.61
VPS29-212ENST00000621131 MPHOSPH6Q99547 160 aaKnown RBP5.02□□□□□ -1.61
VPS29-212ENST00000621131 LMAN2LQ9H0V9 348 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 CUEDC2Q9H467 287 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 VCPKMTQ9H867 229 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 PSTPIP2Q9H939 334 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 JMJD4Q9H9V9 463 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 MAGEF1Q9HAY2 307 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 RMND1Q9NWS8 449 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 IFT80Q9P2H3 777 aaPredicted RBP5.02□□□□□ -1.61
VPS29-212ENST00000621131 HACL1Q9UJ83 578 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 MRPL11Q9Y3B7 192 aaKnown RBP5.02□□□□□ -1.61
VPS29-212ENST00000621131 PAM16Q9Y3D7 125 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 RABGAP1Q9Y3P9 1069 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 EYSQ5T1H1 3165 aa5.02□□□□□ -1.61
VPS29-212ENST00000621131 RBBP6Q7Z6E9 1792 aaKnown RBP5.01□□□□□ -1.61
VPS29-212ENST00000621131 FAM90A7PA6NKC0 464 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 FAM90A22PA8MWA6 464 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 FAM90A12PA8MX19 464 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 FAM90A23PA8MXZ1 464 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 WNT9BO14905 357 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 POLR2DO15514 142 aaKnown RBP5.01□□□□□ -1.61
VPS29-212ENST00000621131 HSPA12AO43301 675 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 PMS2P2O95744 297 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 SP1P08047 785 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 SRD5A1P18405 259 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 MSNP26038 577 aaKnown RBP5.01□□□□□ -1.61
VPS29-212ENST00000621131 EPS15P42566 896 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 BRWD1-AS2P59051 145 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 CALCRLQ16602 461 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 KIF26BQ2KJY2 2108 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 QRICH1Q2TAL8 776 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 JAKMIP3Q5VZ66 844 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 SMIM29Q86T20 159 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 SCYL3Q8IZE3 742 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 ERMNQ8TAM6 284 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 TBCKQ8TEA7 893 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 GDPD5Q8WTR4 605 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 DHX58Q96C10 678 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 BPIFA3Q9BQP9 254 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 FUCA2Q9BTY2 467 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 DEFB129Q9H1M3 183 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 RASSF1Q9NS23 344 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 NCOR1O75376 2440 aa5.01□□□□□ -1.61
VPS29-212ENST00000621131 ASTN2O75129 1339 aaPredicted RBP5□□□□□ -1.61
VPS29-212ENST00000621131 KDM3AQ9Y4C1 1321 aa5□□□□□ -1.61
VPS29-212ENST00000621131 CBY3A6NI87 242 aa5□□□□□ -1.61
VPS29-212ENST00000621131 C19orf81C9J6K1 198 aa5□□□□□ -1.61
VPS29-212ENST00000621131 CLGNO14967 610 aa5□□□□□ -1.61
VPS29-212ENST00000621131 ZBED4O75132 1171 aa5□□□□□ -1.61
VPS29-212ENST00000621131 SOCS5O75159 536 aa5□□□□□ -1.61
VPS29-212ENST00000621131 CLDN14O95500 239 aa5□□□□□ -1.61
VPS29-212ENST00000621131 POLR2MP0CAP2 368 aa5□□□□□ -1.61
VPS29-212ENST00000621131 TFPIP10646 304 aa5□□□□□ -1.61
VPS29-212ENST00000621131 PPP1R2P41236 205 aa5□□□□□ -1.61
VPS29-212ENST00000621131 TPD52L1Q16890 204 aaPredicted RBP5□□□□□ -1.61
VPS29-212ENST00000621131 USH1GQ495M9 461 aa5□□□□□ -1.61
VPS29-212ENST00000621131 KRT79Q5XKE5 535 aa5□□□□□ -1.61
VPS29-212ENST00000621131 HAUS3Q68CZ6 603 aa5□□□□□ -1.61
VPS29-212ENST00000621131 MOXD1Q6UVY6 613 aa5□□□□□ -1.61
VPS29-212ENST00000621131 C9orf139Q6ZV77 190 aa5□□□□□ -1.61
VPS29-212ENST00000621131 SHFQ7M4L6 423 aa5□□□□□ -1.61
VPS29-212ENST00000621131 SUGP1Q8IWZ8 645 aaKnown RBP5□□□□□ -1.61
VPS29-212ENST00000621131 PDILTQ8N807 584 aa5□□□□□ -1.61
VPS29-212ENST00000621131 MLKLQ8NB16 471 aa5□□□□□ -1.61
VPS29-212ENST00000621131 ANKRD20A12PQ8NF67 263 aa5□□□□□ -1.61
VPS29-212ENST00000621131 RAB40AQ8WXH6 277 aa5□□□□□ -1.61
VPS29-212ENST00000621131 CAPNS2Q96L46 248 aa5□□□□□ -1.61
VPS29-212ENST00000621131 SLF1Q9BQI6 1058 aa5□□□□□ -1.61
VPS29-212ENST00000621131 MMTAG2Q9BU76 263 aaKnown RBP5□□□□□ -1.61
VPS29-212ENST00000621131 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5□□□□□ -1.61
VPS29-212ENST00000621131 PANK2Q9BZ23 570 aa5□□□□□ -1.61
VPS29-212ENST00000621131 SPRY4Q9C004 299 aa5□□□□□ -1.61
VPS29-212ENST00000621131 NT5C3AQ9H0P0 336 aa5□□□□□ -1.61
VPS29-212ENST00000621131 CPVLQ9H3G5 476 aa5□□□□□ -1.61
VPS29-212ENST00000621131 STN1Q9H668 368 aaKnown RBP5□□□□□ -1.61
VPS29-212ENST00000621131 UBTD1Q9HAC8 227 aa5□□□□□ -1.61
VPS29-212ENST00000621131 GGA3Q9NZ52 723 aa5□□□□□ -1.61
VPS29-212ENST00000621131 SMARCAL1Q9NZC9 954 aa5□□□□□ -1.61
VPS29-212ENST00000621131 LRWD1Q9UFC0 647 aa5□□□□□ -1.61
VPS29-212ENST00000621131 DDX25Q9UHL0 483 aaKnown RBP5□□□□□ -1.61
VPS29-212ENST00000621131 GDAQ9Y2T3 454 aa5□□□□□ -1.61
VPS29-212ENST00000621131 TRPM7Q96QT4 1865 aa5□□□□□ -1.61
VPS29-212ENST00000621131 C17orf113A0A1B0GUU1 675 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 hDV102S1A0JD36 115 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 RGS11O94810 467 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 TPM2P07951 284 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 CNPP09543 421 aaKnown RBP4.99□□□□□ -1.61
VPS29-212ENST00000621131 MAP2K2P36507 400 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 PIGAP37287 484 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 ECT2LQ008S8 904 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
VPS29-212ENST00000621131 MYL5Q02045 173 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 ACSM2AQ08AH3 577 aa4.99□□□□□ -1.61
VPS29-212ENST00000621131 PNOCQ13519 176 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms