RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TBCBQ99426 244 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 RSPH9Q9H1X1 276 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 IL1RAPQ9NPH3 570 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 RPL36Q9Y3U8 105 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 CDK12Q9NYV4 1490 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 BORCS7-ASMTA0A0B4J1R7 106 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 HNRNPLP14866 589 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 XRCC1P18887 633 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 CLK3P49761 638 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 FBXO47Q5MNV8 452 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 SYVN1Q86TM6 617 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 JAZF1Q86VZ6 243 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 NT5DC4Q86YG4 428 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 ACTR3BQ9P1U1 418 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 ARHGEF15O94989 841 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 PAHP00439 452 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 GH2P01242 217 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ETV5P41161 510 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 NKX2-5P52952 324 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 IGDCC4Q8TDY8 1250 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 RHPN2P1A8MT19 583 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 PAPSS1O43252 624 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 CLCN5P51795 746 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 LSAMPQ13449 338 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 C14orf28Q4W4Y0 310 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 DNAJB7Q7Z6W7 309 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 VTCN1Q7Z7D3 282 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 PNMA5Q96PV4 448 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 CSTF2P33240 577 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 IL6STP40189 918 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 MFSD10Q14728 455 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 RAP1GAP2Q684P5 730 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 RALGPS2Q86X27 583 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 HSPA12AO43301 675 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 NOBOXO60393 691 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 CSF2P04141 144 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 RAP2AP10114 183 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 FAM83AQ86UY5 434 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 PTGR2Q8N8N7 351 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 FAXDC2Q96IV6 333 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF668Q96K58 619 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ZSWIM3Q96MP5 696 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ERVK-6Q9BXR3 956 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 PPP4R1LQ9P1A2 415 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 SLC17A7Q9P2U7 560 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ERVK-18Q9QC07 812 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 FAM205CA6NFA0 338 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 A8MVJ9 347 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 SULT1C2O00338 296 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ITM2AO43736 263 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ABCB7O75027 752 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 DLSTP36957 453 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 CD97P48960 835 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 CRADDP78560 199 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 SLC7A6OSQ96CW6 309 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 CHST7Q9NS84 486 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 FAM86C1Q9NVL1 165 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 TAS2R10Q9NYW0 307 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 C14orf166Q9Y224 244 aaKnown RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 BTRCQ9Y297 605 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 CAP2P40123 477 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 MC2RQ01718 297 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 BOP1Q14137 746 aaKnown RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF773Q6PK81 442 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 ARL11Q969Q4 196 aa14.88□□□□□ -0.03
COL5A1-208ENST00000618395 DIDO1Q9BTC0 2240 aaKnown RBP14.88□□□□□ -0.03
COL5A1-208ENST00000618395 KCNU1A8MYU2 1149 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 UBA1P22314 1058 aaKnown RBP14.87□□□□□ -0.03
COL5A1-208ENST00000618395 SREBF2Q12772 1141 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 DET1Q7L5Y6 550 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF410Q86VK4 478 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 FAIM2Q9BWQ8 316 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 IRF6O14896 467 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 MT-ND1P03886 318 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 PROS1P07225 676 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 ZSCAN5DPP0CG00 497 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 SERPINF1P36955 418 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 HSDL1Q3SXM5 330 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 RNASEH2BQ5TBB1 312 aaKnown RBP14.87□□□□□ -0.03
COL5A1-208ENST00000618395 HNRNPABQ99729 332 aaKnown RBP14.87□□□□□ -0.03
COL5A1-208ENST00000618395 MAF1Q9H063 256 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 SEMA6BQ9H3T3 888 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
COL5A1-208ENST00000618395 SNX15Q9NRS6 342 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 KBTBD4Q9NVX7 518 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 NKX1-2Q9UD57 310 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-208ENST00000618395 TCRBV9S1A1TA0A576 114 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 BTNL10A8MVZ5 291 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 NAT1P18440 290 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 TFEBP19484 476 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 CHRNA5P30532 468 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 DENND1CQ8IV53 801 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 ELMO3Q96BJ8 720 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 FUNDC2Q9BWH2 189 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 UCK2Q9BZX2 261 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 NME7Q9Y5B8 376 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 ATP10BO94823 1461 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 FUOMA2VDF0 154 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 NT5C1B-RDH14C9J2C7 533 aa14.87□□□□□ -0.03
COL5A1-208ENST00000618395 M0R129 80 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms