RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 IRF9Q00978 393 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 MVKQ03426 396 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 NSUN2Q08J23 767 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCL3-205ENST00000613928 ITIH4Q14624 930 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 UGP2Q16851 508 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 INSCQ1MX18 579 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 PLEKHG6Q3KR16 790 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 ZNF789Q5FWF6 425 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 ATXN7L2Q5T6C5 722 aaPredicted RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 N4BP2L1Q5TBK1 243 aaPredicted RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 CES4AQ5XG92 561 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 KYAT3Q6YP21 454 aaKnown RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 CBLL1Q75N03 491 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 CEP68Q76N32 757 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 OTOAQ7RTW8 1153 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 ATG4DQ86TL0 474 aaPredicted RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 SPATS2Q86XZ4 545 aaKnown RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 TMEM25Q86YD3 366 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 SLC41A1Q8IVJ1 513 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 C12orf76Q8N812 135 aaPredicted RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 PNPLA1Q8N8W4 532 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 MDGA1Q8NFP4 955 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 VN1R2Q8NFZ6 395 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 BRSK1Q8TDC3 778 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 BLOC1S5Q8TDH9 187 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 ING5Q8WYH8 240 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 HDAC10Q969S8 669 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 VOPP1Q96AW1 172 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 GRAMD1AQ96CP6 724 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 DNAJC1Q96KC8 554 aaKnown RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 TBATAQ96M53 351 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 FAM167BQ9BTA0 163 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 MECRQ9BV79 373 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 PITPNM3Q9BZ71 974 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 LINC00597Q9H2U6 94 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 MFSD1Q9H3U5 465 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 FBXO6Q9NRD1 293 aaPredicted RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 TDP1Q9NUW8 608 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 CLDND1Q9NY35 253 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 MARCH4Q9P2E8 410 aaPredicted RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 DCDC2Q9UHG0 476 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 FBXL7Q9UJT9 491 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 SLC39A10Q9ULF5 831 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 RIMKLBQ9ULI2 386 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 ARL5AQ9Y689 179 aa8.39□□□□□ -1.07
CCL3-205ENST00000613928 OAS3Q9Y6K5 1087 aaKnown RBP8.39□□□□□ -1.07
CCL3-205ENST00000613928 A0A096LPK6 155 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 CCDC162PA2VCL2 907 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 C22orf46C9J442 243 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 FAM47E-STBD1D6RA91 191 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 KLF11O14901 512 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 BIRC5O15392 142 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 PHGDHO43175 533 aaKnown RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 ZNF821O75541 412 aaPredicted RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 RPP40O75818 363 aaKnown RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 PAPLNO95428 1278 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 GOT2P00505 430 aaKnown RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 IL1BP01584 269 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 CYBBP04839 570 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 PNLIPP16233 465 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 HLA-FP30511 346 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 SLC8A1P32418 973 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 TRHRP34981 398 aaPredicted RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 HADHAP40939 763 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 CD151P48509 253 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 CSNK1DP48730 415 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 POLD2P49005 469 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 ZNF140P52738 457 aaPredicted RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 IRX4P78413 519 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 IFT88Q13099 833 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 KCNC3Q14003 757 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 SEMA3AQ14563 771 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 PTPRRQ15256 657 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 DUSP6Q16828 381 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 PITRM1Q5JRX3 1037 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 RBM20Q5T481 1227 aaKnown RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 ZNF470Q6ECI4 717 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 RETSATQ6NUM9 610 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 CNSTQ6PJW8 725 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 KIAA0408Q6ZU52 694 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 SPATA21Q7Z572 469 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 PTAR1Q7Z6K3 402 aaPredicted RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 LDB1Q86U70 411 aaPredicted RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 NUDCD3Q8IVD9 361 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 ARID3BQ8IVW6 561 aaPredicted RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 CEP97Q8IW35 865 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 ZC3H7AQ8IWR0 971 aaKnown RBP8.38□□□□□ -1.07
CCL3-205ENST00000613928 LPCAT1Q8NF37 534 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 OR13C4Q8NGS5 318 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 ITFG1Q8TB96 612 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 STYXQ8WUJ0 223 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 PEX13Q92968 403 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 RMDN1Q96DB5 314 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 RSPRY1Q96DX4 576 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 CDKN2AIPNLQ96HQ2 116 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 CABS1Q96KC9 395 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 LRRC3BQ96PB8 259 aa8.38□□□□□ -1.07
CCL3-205ENST00000613928 SUDS3Q9H7L9 328 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms