RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 PAFAH1B3Q15102 231 aaKnown RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CDO1Q16878 200 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 C21orf62-AS1Q17RA5 79 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 SPATS1Q496A3 300 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 SV2CQ496J9 727 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CYP27C1Q4G0S4 372 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PERM1Q5SV97 790 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 NCBP2-AS2Q69YL0 99 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ALG1LQ6GMV1 187 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ITPRIPL1Q6GPH6 555 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 MACC1Q6ZN28 852 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CLNKQ7Z7G1 428 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ZSWIM9Q86XI8 627 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CLIP4Q8N3C7 705 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CPA6Q8N4T0 437 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 Q8N9G6 341 aaPredicted RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF417Q8TAU3 575 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 FBXO30Q8TB52 745 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 MCOLN3Q8TDD5 553 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 HTR3CQ8WXA8 447 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 STON2Q8WXE9 905 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PGAP3Q96FM1 320 aaPredicted RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 NSL1Q96IY1 281 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 SPATA13Q96N96 652 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 SLC2A13Q96QE2 648 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF587Q96SQ5 575 aaPredicted RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PTPN18Q99952 460 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 NAT9Q9BTE0 207 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 SMG9Q9H0W8 520 aaKnown RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CPNE5Q9HCH3 593 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 FAM49BQ9NUQ9 324 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 RIC8BQ9NVN3 520 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 GPATCH2LQ9NWQ4 482 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PPARGC1AQ9UBK2 798 aaKnown RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 TINAGQ9UJW2 476 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 INVSQ9Y283 1065 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 MRPS7Q9Y2R9 242 aaKnown RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PCDHA11Q9Y5I1 949 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 RAD54BQ9Y620 910 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ANK1P16157 1881 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 A0A0A6YYJ9 748 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 A0A0G2JPF8 293 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 A0A1B0GTQ1 180 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HEATR9A2RTY3 570 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 EFCAB10A6NFE3 127 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HMX3A6NHT5 357 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 ARGFXA6NJG6 315 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 CCDC85CA6NKD9 419 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SDR42E2A6NKP2 422 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HNRNPCL3B7ZW38 293 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TRIM49D1C9J1S8 452 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 F8W036 122 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SLCO1B7G3V0H7 640 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PSMD12O00232 456 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TOR1BO14657 336 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SNAP91O60641 907 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PIAS1O75925 651 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 AGR2O95994 175 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 ALBP02768 609 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HNRNPCL4P0DMR1 293 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PTPN1P18031 435 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 NR4A2P43354 598 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SEPHS1P49903 392 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SOX4Q06945 474 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SCAPQ12770 1279 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 DLG1Q12959 904 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 ADGRE1Q14246 886 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PDK1Q15118 436 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 WSCD2Q2TBF2 565 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 LRIT3Q3SXY7 679 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HSF5Q4G112 596 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HES5Q5TA89 166 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 UBE2UQ5VVX9 321 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 CDHR3Q6ZTQ4 885 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 C8orf86Q6ZUL3 223 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 CCDC149Q6ZUS6 474 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PLEKHM3Q6ZWE6 761 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PIGZQ86VD9 579 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 MIB1Q86YT6 1006 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TAGAPQ8N103 731 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 DEFB106AQ8N104 65 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PPM1NQ8N819 430 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PCSK9Q8NBP7 692 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SMG8Q8ND04 991 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TFB1MQ8WVM0 346 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 ASZ1Q8WWH4 475 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 ARNTL2Q8WYA1 636 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 AKAP1Q92667 903 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 LPPQ93052 612 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 NTAN1Q96AB6 310 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PLD4Q96BZ4 506 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 ZDHHC12Q96GR4 267 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 AHCYL2Q96HN2 611 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 PARK7Q99497 189 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 OSMRQ99650 979 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TSSK1BQ9BXA7 367 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 NXF3Q9H4D5 531 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms