RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, human

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3B-204	ENST00000612688	WBP2	Q969T9	261 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ASB9	Q96DX5	294 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SMG9	Q9H0W8	520 aa	Known RBP	11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TP63	Q9H3D4	680 aa	Predicted RBP	11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	RAD21L1	Q9H4I0	556 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TRPM5	Q9NZQ8	1165 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	FBXO5	Q9UKT4	447 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TAF4	O00268	1085 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CCL16	O15467	120 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	DLGAP3	O95886	979 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	IGLV3-25	P01717	112 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	PCNA	P12004	261 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	HMGA1	P17096	107 aa	Known RBP	11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	DNAJB1	P25685	340 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	NEK2	P51955	445 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	COPZ1	P61923	177 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SEMA3B	Q13214	749 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	MS4A13	Q5J8X5	152 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	PKN3	Q6P5Z2	889 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	USP43	Q70EL4	1123 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	EPHX4	Q8IUS5	362 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ABHD11	Q8NFV4	315 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ARPC5L	Q9BPX5	153 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TRIM62	Q9BVG3	475 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SLC39A8	Q9C0K1	460 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	PRDM8	Q9NQV8	689 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TLR6	Q9Y2C9	796 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TRAF6	Q9Y4K3	522 aa		11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.64	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ZNF840P	A6NDX5	716 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SOBP	A7XYQ1	873 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	INPP4B	O15327	924 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	NRP2	O60462	931 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ARSD	P51689	593 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SCAP	Q12770	1279 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SELENBP1	Q13228	472 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CAMK2B	Q13554	666 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	DGCR6	Q14129	220 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	AAK1	Q2M2I8	961 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	RABL3	Q5HYI8	236 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	FBXL22	Q6P050	247 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	LGI2	Q8N0V4	545 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ATPAF2	Q8N5M1	289 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SDCCAG3	Q96C92	435 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TMEM74	Q96NL1	305 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CSF3R	Q99062	836 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	C1orf50	Q9BV19	199 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	LHPP	Q9H008	270 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	NANOG	Q9H9S0	305 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	HCFC1R1	Q9NWW0	138 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SLAMF8	Q9P0V8	285 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	IFT80	Q9P2H3	777 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ITGB1BP2	Q9UKP3	347 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	BOLA1	Q9Y3E2	137 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	INSL5	Q9Y5Q6	135 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ACTL7A	Q9Y615	435 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CCDC85C	A6NKD9	419 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TARM1	B6A8C7	271 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688		H0YJX3	145 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	RSL1D1	O76021	490 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ABLIM3	O94929	683 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	MFN2	O95140	757 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	C8B	P07358	591 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ALDOC	P09972	364 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	MBL2	P11226	248 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	GABRR2	P28476	465 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	PPM1A	P35813	382 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	EPHB3	P54753	998 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	MLLT6	P55198	1093 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	RPS24	P62847	133 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	FAM209A	Q5JX71	171 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	C6orf10	Q5SRN2	563 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	HECTD3	Q5T447	861 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	NEPRO	Q6NW34	567 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TMEM207	Q6UWW9	146 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SLCO6A1	Q86UG4	719 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	SNX19	Q92543	992 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	HDAC11	Q96DB2	347 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	TCF12	Q99081	682 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	RAD9A	Q99638	391 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ZNF385D	Q9H6B1	395 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	NT5M	Q9NPB1	228 aa		11.63	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	GOLGA8CP	A6NN73	597 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	ERI2	A8K979	691 aa	Known RBP	11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	AXIN1	O15169	862 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CA3	P07451	260 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CDKN2D	P55273	166 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	CBLB	Q13191	982 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	LRP8	Q14114	963 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	BRMS1L	Q5PSV4	323 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	NAPEPLD	Q6IQ20	393 aa		11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	PDZD4	Q76G19	769 aa	Predicted RBP	11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	DDX28	Q9NUL7	540 aa	Known RBP	11.62	□□□□□ -0.55
PPP4R3B-204	ENST00000612688	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.62	□□□□□ -0.55

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