RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TMEM115Q12893 351 aaPredicted RBP12.12□□□□□ -0.47
CBWD1-220ENST00000612045 PFKFB4Q16877 469 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
CBWD1-220ENST00000612045 FBXO43Q4G163 708 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 ZNF678Q5SXM1 525 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 ADAMTSL2Q86TH1 951 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 WDR75Q8IWA0 830 aaKnown RBP12.12□□□□□ -0.47
CBWD1-220ENST00000612045 MYO1HQ8N1T3 1032 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 PTGR2Q8N8N7 351 aaPredicted RBP12.12□□□□□ -0.47
CBWD1-220ENST00000612045 FAM131CQ96AQ9 280 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 L3HYPDHQ96EM0 354 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 SIKE1Q9BRV8 207 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
CBWD1-220ENST00000612045 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
CBWD1-220ENST00000612045 RAP2CQ9Y3L5 183 aa12.12□□□□□ -0.47
CBWD1-220ENST00000612045 OR2AG2A6NM03 316 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 QSOX1O00391 747 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 TM7SF2O76062 418 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 SNUPNO95149 360 aaKnown RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 CD72P21854 359 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 HK3P52790 923 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 HERVK_113P63132 956 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 PRKAA1Q13131 559 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 PRPF38BQ5VTL8 546 aaKnown RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 CYHR1Q6ZMK1 362 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 YTHDF3Q7Z739 585 aaKnown RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 GPSM1Q86YR5 675 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 FBXO39Q8N4B4 442 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 BEND7Q8N7W2 519 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 RASGEF1AQ8N9B8 481 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 RPLP0P6Q8NHW5 317 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 GANCQ8TET4 914 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 CCT6BQ92526 530 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 ERVK-6Q9BXR3 956 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 ATXN2Q99700 1313 aaKnown RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 NCF1BA6NI72 391 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 NCF1CA8MVU1 366 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 LOC730098B7Z3J9 87 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 EIF3FO00303 357 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 KLK8O60259 260 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 DCTN3O75935 186 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 FTH1P02794 183 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 NCF1P14598 390 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 IL9P15248 144 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 MPSTP25325 297 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 RPL14P50914 215 aaKnown RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 CTSCP53634 463 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 GBX1Q14549 363 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 TGFBIQ15582 683 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 UNC50Q53HI1 259 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 EOGTQ5NDL2 527 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 PLEKHS1Q5SXH7 462 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 SEL1L3Q68CR1 1132 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 CCDC121Q6ZUS5 278 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 RPS27LQ71UM5 84 aaKnown RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 RAB44Q7Z6P3 723 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-220ENST00000612045 DEFB123Q8N688 67 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 SIPA1Q96FS4 1042 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 SHCBP1LQ9BZQ2 653 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 GSTO2Q9H4Y5 243 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 ZDHHC2Q9UIJ5 367 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 TMCO1Q9UM00 188 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 SCML1Q9UN30 329 aa12.11□□□□□ -0.47
CBWD1-220ENST00000612045 ZNF195O14628 629 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 KPNA5O15131 536 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 PLRG1O43660 514 aaKnown RBP12.1□□□□□ -0.47
CBWD1-220ENST00000612045 KIAA0754O94854 1291 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 SUPT7LO94864 414 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
CBWD1-220ENST00000612045 C7P10643 843 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 ENO3P13929 434 aaPredicted RBP12.1□□□□□ -0.47
CBWD1-220ENST00000612045 ALOX15P16050 662 aaPredicted RBP12.1□□□□□ -0.47
CBWD1-220ENST00000612045 PRLHRP49683 370 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 HSPA14Q0VDF9 509 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 GALNT1Q10472 559 aaPredicted RBP12.1□□□□□ -0.47
CBWD1-220ENST00000612045 AGERQ15109 404 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 PPP1R3AQ16821 1122 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 TMEM92Q6UXU6 159 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 ADAMTSL4Q6UY14 1074 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 FRA10AC1Q70Z53 315 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 MAVSQ7Z434 540 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 TRIM74Q86UV6 250 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 PLA2G15Q8NCC3 412 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 OR14C36Q8NHC7 312 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 AGR3Q8TD06 166 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 ELMO1Q92556 727 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 LRRC37BQ96QE4 947 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 TRMOQ9BU70 441 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 FAM126AQ9BYI3 521 aaPredicted RBP12.1□□□□□ -0.47
CBWD1-220ENST00000612045 ZCCHC2Q9C0B9 1178 aaKnown RBP12.1□□□□□ -0.47
CBWD1-220ENST00000612045 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
CBWD1-220ENST00000612045 EPHX3Q9H6B9 360 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms