RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 C19orf43Q9BQ61 176 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 APOL2Q9BQE5 337 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 TRIM56Q9BRZ2 755 aaKnown RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 ZSCAN5AQ9BUG6 496 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 RIOK2Q9BVS4 552 aaKnown RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 TEX101Q9BY14 249 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 SLC32A1Q9H598 525 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 MANSC1Q9H8J5 431 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 UGT1A7Q9HAW7 530 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 UGT1A10Q9HAW8 530 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 UGT1A8Q9HAW9 530 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 DNAJC28Q9NX36 388 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 IL17CQ9P0M4 197 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 PLLPQ9Y342 182 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 PKP3Q9Y446 797 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 USH1CQ9Y6N9 552 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 CFAP73A6NFT4 308 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 COPEO14579 308 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 STX7O15400 261 aaKnown RBP8.73□□□□□ -1.01
SMAD4-217ENST00000611848 PIAS2O75928 621 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 TGDSO95455 350 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 SOD1P00441 154 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 SLC4A1P02730 911 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 BPIP17213 487 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 JUNDP17535 347 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 CSRP1P21291 193 aaKnown RBP8.73□□□□□ -1.01
SMAD4-217ENST00000611848 LPOP22079 712 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-217ENST00000611848 MGAT1P26572 445 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 HNRNPH1P31943 449 aaKnown RBP8.73□□□□□ -1.01
SMAD4-217ENST00000611848 SKIV2L2P42285 1042 aaKnown RBP8.73□□□□□ -1.01
SMAD4-217ENST00000611848 GRK6P43250 576 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 ID4P47928 161 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 SERPINB4P48594 390 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 NCALDP61601 193 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 BNIP3Q12983 259 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 MSLNQ13421 630 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-217ENST00000611848 CRYMQ14894 314 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 SPDYAQ5MJ70 313 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 CDHR3Q6ZTQ4 885 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 PIP4P1Q86T03 277 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 HEATR4Q86WZ0 1026 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 TRAM1L1Q8N609 369 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 OR56A4Q8NGH8 313 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 C10orf82Q8WW14 230 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 TBATAQ96M53 351 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 FAM111AQ96PZ2 611 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 SPATA16Q9BXB7 569 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 SLC13A1Q9BZW2 595 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 C12orf65Q9H3J6 166 aaKnown RBP8.73□□□□□ -1.01
SMAD4-217ENST00000611848 CASS4Q9NQ75 786 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 KLQ9UEF7 1012 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 DGKBQ9Y6T7 804 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 KNTC1P50748 2209 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 LRP4O75096 1905 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 DMXL1Q9Y485 3027 aa8.73□□□□□ -1.01
SMAD4-217ENST00000611848 C2orf72A6NCS6 295 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 NEMP2A6NFY4 417 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 AP3B1O00203 1094 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 DCTN3O75935 186 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 RASGRP1O95267 797 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 TNFP01375 233 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 POLBP06746 335 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CRHR1P34998 444 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SPAM1P38567 509 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 HK3P52790 923 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SESN2P58004 480 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SRP54P61011 504 aaKnown RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 LAMB3Q13751 1172 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 BMPR2Q13873 1038 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ZNF542PQ5EBM4 170 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SPANXN3Q5MJ09 141 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 TMEM135Q86UB9 458 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 NAXDQ8IW45 347 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 PHACTR4Q8IZ21 702 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SDR16C5Q8N3Y7 309 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 DNAAF3Q8N9W5 541 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 GPR26Q8NDV2 337 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ACMSDQ8TDX5 336 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SETD7Q8WTS6 366 aaKnown RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CDKL2Q92772 493 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 COX14Q96I36 57 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 HIC2Q96JB3 615 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 AGAP2Q99490 1192 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 LGR4Q9BXB1 951 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 BPIFA1Q9NP55 256 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SYBUQ9NX95 663 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SPASTQ9UBP0 616 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 APOBEC3BQ9UH17 382 aaKnown RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ARL5AQ9Y689 179 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CSNK1G3Q9Y6M4 447 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ZFC3H1O60293 1989 aaKnown RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 MYLKQ15746 1914 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 MAGEB16A2A368 324 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 WDR91A4D1P6 747 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 TMEM202A6NGA9 273 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 FADS2P1A8MWK0 482 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SCAMP1O15126 338 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 LDB2O43679 373 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms