RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 KLHL32Q96NJ5 620 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 FAM126AQ9BYI3 521 aaPredicted RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 LINC00597Q9H2U6 94 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 NSUN3Q9H649 340 aaKnown RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 SUCOQ9UBS9 1254 aaKnown RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 TNPO3Q9Y5L0 923 aaKnown RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 PRRC2BQ5JSZ5 2229 aaKnown RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 ZNF106Q9H2Y7 1883 aaKnown RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 MYO7AQ13402 2215 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 CASQ2O14958 399 aaPredicted RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 TRIM24O15164 1050 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 MATN4O95460 622 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 LHCGRP22888 699 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 SLC7A2P52569 658 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 AQP4P55087 323 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 PTSQ03393 145 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 SLC5A9Q2M3M2 681 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 ARHGAP15Q53QZ3 475 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 CARD16Q5EG05 197 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 XKR7Q5GH72 579 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 OGFOD2Q6N063 350 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 TMEM154Q6P9G4 183 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 HACD2Q6Y1H2 254 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 GOLGA7Q7Z5G4 137 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 ADGRG2Q8IZP9 1017 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 POF1BQ8WVV4 589 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 IRF7Q92985 503 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 LRGUKQ96M69 825 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 EGFL8Q99944 293 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 EBF3Q9H4W6 596 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 COPS7BQ9H9Q2 264 aaPredicted RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 PFDN4Q9NQP4 134 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 LATS2Q9NRM7 1088 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 TMEM181Q9P2C4 612 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 NDUFAF1Q9Y375 327 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 GPR45Q9Y5Y3 372 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 PIKFYVEQ9Y2I7 2098 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 CXorf51AA0A1B0GTR3 108 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 MOSPD3O75425 235 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEK3-205ENST00000610828 POP4O95707 220 aaKnown RBP13.42□□□□□ -0.26
NEK3-205ENST00000610828 PRR35P0CG20 571 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 NSG1P42857 185 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 HSPA7P48741 367 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 GTF2H2Q13888 395 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 PCBP2Q15366 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEK3-205ENST00000610828 MAP7D1Q3KQU3 841 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 ATP13A5Q4VNC0 1218 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 SAMD4BQ5PRF9 694 aaKnown RBP13.42□□□□□ -0.26
NEK3-205ENST00000610828 GPRC6AQ5T6X5 926 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 GTF2H2CQ6P1K8 395 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 C8orf82Q6P1X6 216 aaPredicted RBP13.42□□□□□ -0.26
NEK3-205ENST00000610828 MACC1Q6ZN28 852 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 RFLNAQ6ZTI6 216 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 SPATA19Q7Z5L4 167 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 CHST14Q8NCH0 376 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 PDPRQ8NCN5 879 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 OR2T11Q8NH01 316 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 METTL6Q8TCB7 284 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 PBXIP1Q96AQ6 731 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 ARMC5Q96C12 935 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 HBEGFQ99075 208 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 C1orf50Q9BV19 199 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 CPEB1Q9BZB8 566 aaKnown RBP13.42□□□□□ -0.26
NEK3-205ENST00000610828 SPHK2Q9NRA0 654 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 SPATS2LQ9NUQ6 558 aaKnown RBP13.42□□□□□ -0.26
NEK3-205ENST00000610828 TLL1O43897 1013 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 KATNA1O75449 491 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 CAPN1P07384 714 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 DDX6P26196 483 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEK3-205ENST00000610828 BMPR1AP36894 532 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 EPHA5P54756 1037 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 NTHL1P78549 312 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 PHKG1Q16816 387 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 NAT16Q8N8M0 369 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 FNDC5Q8NAU1 212 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 BADQ92934 168 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 MIEF2Q96C03 454 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 RAD9AQ99638 391 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 BRD9Q9H8M2 597 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 IPPKQ9H8X2 491 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 RIC8BQ9NVN3 520 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 MAP10Q9P2G4 905 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 PPIL1Q9Y3C6 166 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 OARD1Q9Y530 152 aa13.42□□□□□ -0.26
NEK3-205ENST00000610828 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
NEK3-205ENST00000610828 AGAP14A8MT82 685 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 OR7A17O14581 309 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 FGF19O95750 216 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 ATP6AP1LQ52LC2 224 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 LY6G5CQ5SRR4 150 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 OGFRL1Q5TC84 451 aaPredicted RBP13.41□□□□□ -0.26
NEK3-205ENST00000610828 BLOC1S3Q6QNY0 202 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 OR4F6Q8NGB9 312 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 TEX37Q96LM6 180 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms