RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 ACRV1P26436 265 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 CD1CP29017 333 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 CTSCP53634 463 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 SARNPP82979 210 aaKnown RBP18.88■□□□□ 0.61
SRSF4-206ENST00000605204 TMPRSS15P98073 1019 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 TPSAB1Q15661 275 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 AMZ1Q400G9 498 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 ZRANB3Q5FWF4 1079 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 C3orf38Q5JPI3 329 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 FNBP1LQ5T0N5 605 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 LYPLAL1Q5VWZ2 237 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 TMEM220Q6QAJ8 160 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 PPHLN1Q8NEY8 458 aaKnown RBP18.88■□□□□ 0.61
SRSF4-206ENST00000605204 GRK7Q8WTQ7 553 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 IL22Q9GZX6 179 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 EPB41L5Q9HCM4 733 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 ACSL5Q9ULC5 683 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 KNTC1P50748 2209 aa18.88■□□□□ 0.61
SRSF4-206ENST00000605204 ZNF106Q9H2Y7 1883 aaKnown RBP18.88■□□□□ 0.61
SRSF4-206ENST00000605204 OR2AG2A6NM03 316 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 RRP8O43159 456 aaKnown RBP18.87■□□□□ 0.61
SRSF4-206ENST00000605204 AP2A2O94973 939 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 ZSCAN5DPP0CG00 497 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 ATP1B2P14415 290 aaPredicted RBP18.87■□□□□ 0.61
SRSF4-206ENST00000605204 KCNJ1P48048 391 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 FNTAP49354 379 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 PRLHRP49683 370 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 ACVR1Q04771 509 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 CCDC173Q0VFZ6 552 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 ITIH4Q14624 930 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 GSE1Q14687 1217 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 WDR74Q6RFH5 385 aaPredicted RBP18.87■□□□□ 0.61
SRSF4-206ENST00000605204 AFTPHQ6ULP2 937 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 CERS6Q6ZMG9 384 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 RAB11FIP2Q7L804 512 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 B3GNT8Q7Z7M8 397 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 OR2L2Q8NH16 312 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 SGSM3Q96HU1 749 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 SLC46A1Q96NT5 459 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 DCBLD2Q96PD2 775 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 BFARQ9NZS9 450 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 ATXN7L1Q9ULK2 861 aaPredicted RBP18.87■□□□□ 0.61
SRSF4-206ENST00000605204 TCAF1Q9Y4C2 921 aa18.87■□□□□ 0.61
SRSF4-206ENST00000605204 C17orf113A0A1B0GUU1 675 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 PPARGP37231 505 aaPredicted RBP18.86■□□□□ 0.61
SRSF4-206ENST00000605204 MAGEA6P43360 314 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 PCBP4P57723 403 aaKnown RBP18.86■□□□□ 0.61
SRSF4-206ENST00000605204 TSTD2Q5T7W7 516 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 METRNLQ641Q3 311 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 FBXO39Q8N4B4 442 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 CXorf40BQ96DE9 158 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 CCDC97Q96F63 343 aaPredicted RBP18.86■□□□□ 0.61
SRSF4-206ENST00000605204 MS4A14Q96JA4 679 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 FOXP3Q9BZS1 431 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 B3GNT4Q9C0J1 378 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 ZMYND15Q9H091 742 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 ASCL3Q9NQ33 180 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 PIH1D1Q9NWS0 290 aaKnown RBP18.86■□□□□ 0.61
SRSF4-206ENST00000605204 ASXL3Q9C0F0 2248 aa18.86■□□□□ 0.61
SRSF4-206ENST00000605204 HELZ2Q9BYK8 2649 aaKnown RBP18.85■□□□□ 0.61
SRSF4-206ENST00000605204 TLX3O43711 291 aaPredicted RBP18.85■□□□□ 0.61
SRSF4-206ENST00000605204 PHF2O75151 1096 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 JMJD7P0C870 316 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 ITPKBP27987 946 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 NSG1P42857 185 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 NPY2RP49146 381 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 LIMK2P53671 638 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 SEPT7Q16181 437 aaKnown RBP18.85■□□□□ 0.61
SRSF4-206ENST00000605204 AARS2Q5JTZ9 985 aaKnown RBP18.85■□□□□ 0.61
SRSF4-206ENST00000605204 PCID2Q5JVF3 399 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 PHF19Q5T6S3 580 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 TMEM71Q6P5X7 295 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 CCDC137Q6PK04 289 aaKnown RBP18.85■□□□□ 0.61
SRSF4-206ENST00000605204 PACS1Q6VY07 963 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 TMEM26Q6ZUK4 368 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 TAS2R42Q7RTR8 314 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 CLEC14AQ86T13 490 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 PRUNE1Q86TP1 453 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 SERPINA9Q86WD7 417 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 ZNF248Q8NDW4 579 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 OR13J1Q8NGT2 312 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 HM13Q8TCT9 377 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 COG1Q8WTW3 980 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 SGF29Q96ES7 293 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 NUDT22Q9BRQ3 303 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 CCM2Q9BSQ5 444 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 AP1M1Q9BXS5 423 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 RDH14Q9HBH5 336 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 PCDHGA7Q9Y5G6 932 aa18.85■□□□□ 0.61
SRSF4-206ENST00000605204 TRBV23OR9-2A0A075B6M9 112 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 BRAFP15056 766 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 RPL10P27635 214 aaKnown RBP18.84■□□□□ 0.61
SRSF4-206ENST00000605204 CA5AP35218 305 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 COILP38432 576 aaPredicted RBP18.84■□□□□ 0.61
SRSF4-206ENST00000605204 GRIA1P42261 906 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 PRAMEP78395 509 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 LRRC8BQ6P9F7 803 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 ZNF449Q6P9G9 518 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 LRRC69Q6ZNQ3 347 aa18.84■□□□□ 0.61
SRSF4-206ENST00000605204 DET1Q7L5Y6 550 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms