RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 OR5K4A6NMS3 321 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 CCL22O00626 93 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 STK10O94804 968 aaKnown RBP13.52□□□□□ -0.25
SCAF1-203ENST00000598359 VIPP01282 170 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 CETN2P41208 172 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 GFERP55789 205 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 TMPRSS15P98073 1019 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 KIF5AQ12840 1032 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 GTF2H3Q13889 308 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 LY6DQ14210 128 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 PRPSAP1Q14558 356 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 CLCA4Q14CN2 919 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 DENND5AQ6IQ26 1287 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 TMEM220Q6QAJ8 160 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 WDR74Q6RFH5 385 aaPredicted RBP13.52□□□□□ -0.25
SCAF1-203ENST00000598359 DTX1Q86Y01 620 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 LURAP1LQ8IV03 231 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 TRIM48Q8IWZ4 208 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 BEND7Q8N7W2 519 aaPredicted RBP13.52□□□□□ -0.25
SCAF1-203ENST00000598359 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 OR13C4Q8NGS5 318 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.25
SCAF1-203ENST00000598359 ANKRD7Q92527 254 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 TTC25Q96NG3 672 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 TAAR9Q96RI9 348 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 LZTFL1Q9NQ48 299 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 PDP2Q9P2J9 529 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 FAM8A1Q9UBU6 413 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 PSMD13Q9UNM6 376 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 MRFAP1Q9Y605 127 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.25
SCAF1-203ENST00000598359 ERVH48-1M5A8F1 160 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 PRAMEF1O95521 474 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 METTL18O95568 372 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 XRCC1P18887 633 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 LPOP22079 712 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 IDSP22304 550 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 AKT1P31749 480 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 GDF10P55107 478 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 RHDQ02161 417 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 MSLNQ13421 630 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 NFE2L1Q14494 772 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 TAF1AQ15573 450 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 FNBP1LQ5T0N5 605 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 TMEM164Q5U3C3 297 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 ZDHHC20Q5W0Z9 365 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 ANKS6Q68DC2 871 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 TMEM26Q6ZUK4 368 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 ARHGAP22Q7Z5H3 698 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 TXLNBQ8N3L3 684 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 UBL4BQ8N7F7 174 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 BMPERQ8N8U9 685 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 DDHD1Q8NEL9 900 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 ZNF398Q8TD17 642 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 TTC9Q92623 222 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 TBL1YQ9BQ87 522 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 FERMT1Q9BQL6 677 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 SEMA4CQ9C0C4 833 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 FAM96AQ9H5X1 160 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 APMAPQ9HDC9 416 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 PIH1D1Q9NWS0 290 aaKnown RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 AAR2Q9Y312 384 aaKnown RBP13.51□□□□□ -0.25
SCAF1-203ENST00000598359 PIEZO2Q9H5I5 2752 aa13.51□□□□□ -0.25
SCAF1-203ENST00000598359 SDK2Q58EX2 2172 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 C2orf81A6NN90 581 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 KRT86O43790 486 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 UBXN7O94888 489 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 TPH1P17752 444 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 LEPRP48357 1165 aaKnown RBP13.5□□□□□ -0.25
SCAF1-203ENST00000598359 EPHA4P54764 986 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 CYP4F2P78329 520 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 XIAPP98170 497 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 KLF1Q13351 362 aaPredicted RBP13.5□□□□□ -0.25
SCAF1-203ENST00000598359 ITGA9Q13797 1035 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 GPR18Q14330 331 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 ABRAXAS1Q6UWZ7 409 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 ARHGEF18Q6ZSZ5 1173 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 SLC35F6Q8N357 371 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 GPR150Q8NGU9 434 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 BRSK1Q8TDC3 778 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 ATG4AQ8WYN0 398 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 RSC1A1Q92681 617 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 CXorf40BQ96DE9 158 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 SGF29Q96ES7 293 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 TGM7Q96PF1 710 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 TMEM121Q9BTD3 319 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 ASB8Q9H765 288 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCAF1-203ENST00000598359 PCDHB11Q9Y5F2 797 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 320 ms