RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 AVL9Q8NBF6 648 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 LIN37Q96GY3 246 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 LINC00615Q96LM1 132 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 TMEM74Q96NL1 305 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 SLC38A3Q99624 504 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 NAPGQ99747 312 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 FOXP3Q9BZS1 431 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 IL22Q9GZX6 179 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 RDH14Q9HBH5 336 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 CHRAC1Q9NRG0 131 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 BFARQ9NZS9 450 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 ZNF624Q9P2J8 865 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-204ENST00000597724 SLC2A6Q9UGQ3 507 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 KIF26BQ2KJY2 2108 aa16.43■□□□□ 0.22
SSBP4-204ENST00000597724 CCDC187A0A096LP49 1063 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 MGAT4DA6NG13 374 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 OR51F1A6NGY5 319 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 TMX2-CTNND1H3BSU7 103 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 BRINP1O60477 761 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 FOXN2P32314 431 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 PRLHRP49683 370 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 GABREP78334 506 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 NFE2L1Q14494 772 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 DBN1Q16643 649 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 NKAIN2Q5VXU1 208 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 LRRC8BQ6P9F7 803 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 ZNF574Q6ZN55 896 aaPredicted RBP16.42■□□□□ 0.22
SSBP4-204ENST00000597724 CREG2Q8IUH2 290 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 LSMEM2Q8N112 164 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 PPHLN1Q8NEY8 458 aaKnown RBP16.42■□□□□ 0.22
SSBP4-204ENST00000597724 OR2L2Q8NH16 312 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 WDR36Q8NI36 951 aaKnown RBP16.42■□□□□ 0.22
SSBP4-204ENST00000597724 GRK7Q8WTQ7 553 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 NUDT22Q9BRQ3 303 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 EPB41L5Q9HCM4 733 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 SATB2Q9UPW6 733 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 WDR37Q9Y2I8 494 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 SAR1BQ9Y6B6 198 aa16.42■□□□□ 0.22
SSBP4-204ENST00000597724 CTAGE9A4FU28 777 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 OR52A4PA6NMU1 304 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 SRRM3A6NNA2 597 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-204ENST00000597724 FANCGO15287 622 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 DXOO77932 396 aaKnown RBP16.41■□□□□ 0.22
SSBP4-204ENST00000597724 GOT2P00505 430 aaKnown RBP16.41■□□□□ 0.22
SSBP4-204ENST00000597724 VIPP01282 170 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 PBLDP30039 288 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-204ENST00000597724 TERF1P54274 439 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 CRADDP78560 199 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 SARNPP82979 210 aaKnown RBP16.41■□□□□ 0.22
SSBP4-204ENST00000597724 CFHR1Q03591 330 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 CLCA4Q14CN2 919 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 C3orf38Q5JPI3 329 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 ANKRD22Q5VYY1 191 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 IGF2-ASQ6U949 168 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 XKR5Q6UX68 686 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 TRIM48Q8IWZ4 208 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 OR4L1Q8NH43 312 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 CPT1BQ92523 772 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 PRR11Q96HE9 360 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-204ENST00000597724 SGSM3Q96HU1 749 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 STRADBQ9C0K7 418 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 SEMA6CQ9H3T2 930 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 UCK1Q9HA47 277 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 PSMD13Q9UNM6 376 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 PCDHGA8Q9Y5G5 932 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 CELSR3Q9NYQ7 3312 aa16.41■□□□□ 0.22
SSBP4-204ENST00000597724 IGHV5-10-1A0A0J9YXX1 117 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 C17orf113A0A1B0GUU1 675 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 PMS2P1A4D2B8 440 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 LILRA5A6NI73 299 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 HOXB3P14651 431 aaPredicted RBP16.4■□□□□ 0.22
SSBP4-204ENST00000597724 MGAT1P26572 445 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 HALP42357 657 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 EPHA4P54764 986 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 EIF3IQ13347 325 aaKnown RBP16.4■□□□□ 0.22
SSBP4-204ENST00000597724 ITIH4Q14624 930 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 AFTPHQ6ULP2 937 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 TMEM26Q6ZUK4 368 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 RAB11FIP2Q7L804 512 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 CLDN19Q8N6F1 224 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 OR4D9Q8NGE8 314 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 OR6P1Q8NGX9 317 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 OR10G6Q8NH81 332 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 CXorf40BQ96DE9 158 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 AHCYL2Q96HN2 611 aaKnown RBP16.4■□□□□ 0.22
SSBP4-204ENST00000597724 CAPZA3Q96KX2 299 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 DPYSL5Q9BPU6 564 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 TBC1D10AQ9BXI6 508 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 DDX47Q9H0S4 455 aaKnown RBP16.4■□□□□ 0.22
SSBP4-204ENST00000597724 SLC40A1Q9NP59 571 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 TREX1Q9NSU2 369 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 POT1Q9NUX5 634 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 FAM8A1Q9UBU6 413 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 ACSL5Q9ULC5 683 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 RAXQ9Y2V3 346 aa16.4■□□□□ 0.22
SSBP4-204ENST00000597724 URB1O60287 2271 aaKnown RBP16.4■□□□□ 0.22
SSBP4-204ENST00000597724 PKD1L2Q7Z442 2459 aa16.39■□□□□ 0.21
SSBP4-204ENST00000597724 CACNA1BQ00975 2339 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms