RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 TPRG1Q6ZUI0 275 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 NXPE1Q8N323 547 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 CLDN19Q8N6F1 224 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 GATA6Q92908 595 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 IRF7Q92985 503 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 PPP2R3CQ969Q6 453 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 MCCC1Q96RQ3 725 aaPredicted RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 GPATCH1Q9BRR8 931 aaKnown RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 BBS2Q9BXC9 721 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 CPEB1Q9BZB8 566 aaKnown RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 CEP44Q9C0F1 390 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 PFDN4Q9NQP4 134 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 TBC1D14Q9P2M4 693 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 RIMS3Q9UJD0 308 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 EIF4E1BA6NMX2 242 aaKnown RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 C5orf67F2Z3F1 127 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 C8BP07358 591 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 TRAP1Q12931 704 aaKnown RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 GRIK2Q13002 908 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 CAMK1Q14012 370 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 COQ5Q5HYK3 327 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 SAMD4BQ5PRF9 694 aaKnown RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 ASTLQ6HA08 431 aaPredicted RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 USP45Q70EL2 814 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 MYO1HQ8N1T3 1032 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 GPR26Q8NDV2 337 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 OR52B6Q8NGF0 335 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 MTIF3Q9H2K0 278 aaKnown RBP19.42■□□□□ 0.7
CLIP3-206ENST00000593074 SUV39H2Q9H5I1 410 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 AIG1Q9NVV5 245 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 EPS15L1Q9UBC2 864 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 SLC25A13Q9UJS0 675 aa19.42■□□□□ 0.7
CLIP3-206ENST00000593074 RAD51BO15315 384 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 FFAR2O15552 330 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 OR4F21O95013 312 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 SLC25A14O95258 325 aaPredicted RBP19.41■□□□□ 0.7
CLIP3-206ENST00000593074 SYN1P17600 705 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 DGKAP23743 735 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 AQP4P55087 323 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 NME5P56597 212 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 ERVPABLB-1P60509 514 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 NTHL1P78549 312 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 RALGDSQ12967 914 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 ADGRE1Q14246 886 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 GPRC6AQ5T6X5 926 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 ZBTB2Q8N680 514 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 TSPEARQ8WU66 669 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 NAT14Q8WUY8 206 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 BRINP2Q9C0B6 783 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 LINC00597Q9H2U6 94 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 EBF3Q9H4W6 596 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 SLC52A3Q9NQ40 469 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 MAP10Q9P2G4 905 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 OARD1Q9Y530 152 aa19.41■□□□□ 0.7
CLIP3-206ENST00000593074 MTCL1Q9Y4B5 1905 aaKnown RBP19.41■□□□□ 0.7
CLIP3-206ENST00000593074 S100BP04271 92 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 RB1P06400 928 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 CHRM1P11229 460 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 ITGB6P18564 788 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 CCNHP51946 323 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 DIO3P55073 304 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 LRRC66Q68CR7 880 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 LETMD1Q6P1Q0 360 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 BLOC1S3Q6QNY0 202 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 SPRED2Q7Z698 418 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 ZNF557Q8N988 423 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 OR2T11Q8NH01 316 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 SPHK2Q9NRA0 654 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 PTBP2Q9UKA9 531 aaKnown RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 A8MX80 341 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 BNIP3LO60238 219 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 TRIM16O95361 564 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 PABPC1P11940 636 aaKnown RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 VPS26BQ4G0F5 336 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 PRSS36Q5K4E3 855 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 C6orf10Q5SRN2 563 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 ZNF697Q5TEC3 545 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 PRMT9Q6P2P2 845 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 LAYNQ6UX15 382 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 GOLGA7Q7Z5G4 137 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 GRASPQ7Z6J2 395 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 CDYL2Q8N8U2 506 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 ZNF641Q96N77 438 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 ACOX2Q99424 681 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 SLC39A3Q9BRY0 314 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 FAM126AQ9BYI3 521 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 NOL11Q9H8H0 719 aaKnown RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 LATS2Q9NRM7 1088 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 RIC8BQ9NVN3 520 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 ABCD2Q9UBJ2 740 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 TSR3Q9UJK0 312 aaKnown RBP19.4■□□□□ 0.7
CLIP3-206ENST00000593074 DOCK6Q96HP0 2047 aa19.4■□□□□ 0.7
CLIP3-206ENST00000593074 ANGPT2O15123 496 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 TYRP14679 529 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 LHCGRP22888 699 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 SLC7A2P52569 658 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ATXN3P54252 364 aaPredicted RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ERVK-8P63133 956 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 RCAN2Q14206 197 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 RPS6KA2Q15349 733 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms