RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 RPE65Q16518 533 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 PLEKHN1Q494U1 663 aaPredicted RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 KHDC1Q4VXA5 237 aaKnown RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 DNTTIP2Q5QJE6 756 aaKnown RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 PLEKHS1Q5SXH7 462 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 TMTC4Q5T4D3 741 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 SLC6A19Q695T7 634 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 CCDC70Q6NSX1 233 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 MED25Q71SY5 747 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 C11orf96Q7Z7L8 435 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 AMZ2Q86W34 360 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 TRAPPC5Q8IUR0 188 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 MAP7D3Q8IWC1 876 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 D2HGDHQ8N465 521 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 TTC30BQ8N4P2 665 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 CNTD1Q8N815 330 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 TMEM102Q8N9M5 508 aaPredicted RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 GLIS1Q8NBF1 620 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 SLC38A9Q8NBW4 561 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 BRSK1Q8TDC3 778 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 ADAMTS17Q8TE56 1095 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 ZNF501Q96CX3 271 aaPredicted RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 TCTN2Q96GX1 697 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 CD180Q99467 661 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 TUBB2BQ9BVA1 445 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 NUDT9Q9BW91 350 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 GPR83Q9NYM4 423 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 NFKBIL1Q9UBC1 381 aaPredicted RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 ERRFI1Q9UJM3 462 aaPredicted RBP8.96□□□□□ -0.98
APOC1-207ENST00000592176 ANAPC7Q9UJX3 599 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 SNX7Q9UNH6 387 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 SLC5A6Q9Y289 635 aa8.96□□□□□ -0.98
APOC1-207ENST00000592176 TLCD2A6NGC4 264 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 KCNK1O00180 336 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 ZBTB11O95625 1053 aaPredicted RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 VAV2P52735 878 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 RRADP55042 308 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 ITGA1P56199 1179 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 GBE1Q04446 702 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 CDK18Q07002 472 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 ATP13A5Q4VNC0 1218 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 LCN10Q6JVE6 187 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 ARMC6Q6NXE6 501 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 ZNF517Q6ZMY9 492 aaPredicted RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 NT5DC3Q86UY8 548 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 TICAM1Q8IUC6 712 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 SRRM1Q8IYB3 904 aaKnown RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 CISD2Q8N5K1 135 aaKnown RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 ENDOVQ8N8Q3 282 aaKnown RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 TTC13Q8NBP0 860 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 CPT1BQ92523 772 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 HDAC11Q96DB2 347 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 SNRNP40Q96DI7 357 aaKnown RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 CLIP3Q96DZ5 547 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 C5orf34Q96MH7 638 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 LRFN5Q96NI6 719 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 VPS35Q96QK1 796 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 TRIB3Q96RU7 358 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 SRPK1Q96SB4 655 aaKnown RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 SMAD5Q99717 465 aaKnown RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 ZNF670Q9BS34 389 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 NLNQ9BYT8 704 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 THAP2Q9H0W7 228 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 BPIFA1Q9NP55 256 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 LATS2Q9NRM7 1088 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 ASF1BQ9NVP2 202 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 C5AR2Q9P296 337 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 TCFL5Q9UL49 500 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 TMPRSS11EQ9UL52 423 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 PSMD13Q9UNM6 376 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 ZNF711Q9Y462 761 aa8.95□□□□□ -0.98
APOC1-207ENST00000592176 DNMT3AQ9Y6K1 912 aaPredicted RBP8.95□□□□□ -0.98
APOC1-207ENST00000592176 CREBBPQ92793 2442 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 OR6C74A6NCV1 312 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 OR5K3A6NET4 321 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 CYP1A2P05177 515 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 TNFRSF8P28908 595 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 GJC1P36383 396 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 IFI35P80217 286 aaPredicted RBP8.94□□□□□ -0.98
APOC1-207ENST00000592176 DMPKQ09013 629 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 XRCC4Q13426 336 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 ELOAQ14241 798 aaKnown RBP8.94□□□□□ -0.98
APOC1-207ENST00000592176 PCSK7Q16549 785 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 FILIP1LQ4L180 1135 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 ZRANB3Q5FWF4 1079 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 FAM182AQ5T1J6 154 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 E4F1Q66K89 784 aaPredicted RBP8.94□□□□□ -0.98
APOC1-207ENST00000592176 TMEM220Q6QAJ8 160 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 OOSP2Q86WS3 158 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 DSELQ8IZU8 1212 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 IQCKQ8N0W5 287 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 SLC34A3Q8N130 599 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 CARFQ8N187 725 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 ZBTB2Q8N680 514 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 PQLC3Q8N755 202 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 BEND7Q8N7W2 519 aaPredicted RBP8.94□□□□□ -0.98
APOC1-207ENST00000592176 GPR150Q8NGU9 434 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 ZFPM2Q8WW38 1151 aa8.94□□□□□ -0.98
APOC1-207ENST00000592176 IMP4Q96G21 291 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms