RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 C8orf33Q9H7E9 229 aaPredicted RBP3.47□□□□□ -1.85
VMP1-212ENST00000591782 PPP1R3EQ9H7J1 279 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 VCPKMTQ9H867 229 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 CD93Q9NPY3 652 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 HINT3Q9NQE9 182 aaKnown RBP3.47□□□□□ -1.85
VMP1-212ENST00000591782 CNGB3Q9NQW8 809 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 OLA1Q9NTK5 396 aaKnown RBP3.47□□□□□ -1.85
VMP1-212ENST00000591782 ABI3Q9P2A4 366 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 MBD2Q9UBB5 411 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 SLCO3A1Q9UIG8 710 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 TINAGQ9UJW2 476 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 ERVK-11Q9UQG0 969 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 SNX9Q9Y5X1 595 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 CEPT1Q9Y6K0 416 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 PIAS3Q9Y6X2 628 aa3.47□□□□□ -1.85
VMP1-212ENST00000591782 IGLV5-37A0A075B6J1 123 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 A0A1W2PQF6 199 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 MACROD2A1Z1Q3 448 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 LRRD1A4D1F6 860 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 PI4K2BG5E9Z4 385 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 SOCS6O14544 535 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 YKT6O15498 198 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 ZBTB43O43298 467 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 PLRG1O43660 514 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 ZBTB14O43829 449 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 EXTL3O43909 919 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 KLHL41O60662 606 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 FRAT2O75474 233 aaPredicted RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 PPP1R3DO95685 299 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 FTCDO95954 541 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 AFPP02771 609 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 EPB41P11171 864 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 TOP1P11387 765 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 PCP11498 1178 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 MAOAP21397 527 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 TCF7P36402 384 aaPredicted RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 METAP2P50579 478 aaKnown RBP eCLIP3.46□□□□□ -1.86
VMP1-212ENST00000591782 ART1P52961 327 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 LIMK1P53667 647 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CLNS1AP54105 237 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 RRP1P56182 461 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 KRT83P78385 493 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 AP1B1Q10567 949 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 OLIG2Q13516 323 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CUL3Q13618 768 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 KRT32Q14532 448 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 STK11Q15831 433 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 PKN2Q16513 984 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 ASIC2Q16515 512 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 USP41Q3LFD5 358 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 DPCR1Q3MIW9 517 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CCDC153Q494R4 210 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CXorf66Q5JRM2 361 aaPredicted RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 C6orf141Q5SZD1 244 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 RUSC1-AS1Q66K80 236 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 HAUS3Q68CZ6 603 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 PLEKHA7Q6IQ23 1121 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 C11orf88Q6PI97 169 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CORO6Q6QEF8 472 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 SLC36A4Q6YBV0 504 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 TAOK1Q7L7X3 1001 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 GSTA5Q7RTV2 222 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 DGLUCYQ7Z3D6 616 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 HOOK3Q86VS8 718 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 DSELQ8IZU8 1212 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 SLC7A5P1Q8MH63 180 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 SPATA6LQ8N4H0 392 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CCDC63Q8NA47 563 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 IQUBQ8NA54 791 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 TMEM116Q8NCL8 245 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 ZNF397Q8NF99 534 aaPredicted RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 ANKRD7Q92527 254 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 HDAC2Q92769 488 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 FAM149B1Q96BN6 582 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 EFHD2Q96C19 240 aaPredicted RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 RTP4Q96DX8 246 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 MTBPQ96DY7 904 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 SNF8Q96H20 258 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 WDFY2Q96P53 400 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CATSPER2Q96P56 530 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 RBM14Q96PK6 669 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 ALS2CR12Q96Q35 445 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 CCT7Q99832 543 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 KXD1Q9BQD3 176 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 TMEM47Q9BQJ4 181 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 EDEM3Q9BZQ6 932 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 FAM129AQ9BZQ8 928 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 C6orf106Q9H6K1 298 aaPredicted RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 WDR26Q9H7D7 661 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 ZWILCHQ9H900 591 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 C17orf75Q9HAS0 396 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 FBRSL1Q9HCM7 1045 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 VPS18Q9P253 973 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 POLKQ9UBT6 870 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 LIMA1Q9UHB6 759 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 CIDEBQ9UHD4 219 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 DDX25Q9UHL0 483 aaKnown RBP3.46□□□□□ -1.86
VMP1-212ENST00000591782 SH3BGRL2Q9UJC5 107 aa3.46□□□□□ -1.86
VMP1-212ENST00000591782 ZNF580Q9UK33 172 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms