RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 FUBP1Q96AE4 644 aaKnown RBP11.9□□□□□ -0.5
CCBE1-203ENST00000589116 TMEM237Q96Q45 408 aa11.9□□□□□ -0.5
CCBE1-203ENST00000589116 LRRC37BQ96QE4 947 aa11.9□□□□□ -0.5
CCBE1-203ENST00000589116 EML4Q9HC35 981 aaKnown RBP11.9□□□□□ -0.5
CCBE1-203ENST00000589116 HEBP1Q9NRV9 189 aa11.9□□□□□ -0.5
CCBE1-203ENST00000589116 ABCF3Q9NUQ8 709 aa11.9□□□□□ -0.5
CCBE1-203ENST00000589116 MARCOQ9UEW3 520 aaPredicted RBP11.9□□□□□ -0.5
CCBE1-203ENST00000589116 LIMD1Q9UGP4 676 aa11.9□□□□□ -0.5
CCBE1-203ENST00000589116 NPEPPSL1A6NEC2 478 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 SUPT3HB4E1H0 165 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 SLCO1B7G3V0H7 640 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 STX16-NPEPL1H3BU86 382 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 STX16O14662 325 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 MID1O15344 667 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 KLK8O60259 260 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 LZTS3O60299 673 aaPredicted RBP11.89□□□□□ -0.51
CCBE1-203ENST00000589116 SUPT3HO75486 399 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 EGFP01133 1207 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 FTH1P02794 183 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 C7P10643 843 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 KITP10721 976 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 COPAP53621 1224 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 HERVK_113P63132 956 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 SMAD2Q15796 467 aaKnown RBP11.89□□□□□ -0.51
CCBE1-203ENST00000589116 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
CCBE1-203ENST00000589116 FBXO43Q4G163 708 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 ARL13AQ5H913 290 aaPredicted RBP11.89□□□□□ -0.51
CCBE1-203ENST00000589116 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 ZNF678Q5SXM1 525 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 AGBL4Q5VU57 503 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 FRMD7Q6ZUT3 714 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 AADATQ8N5Z0 425 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 CCNYL1Q8N7R7 359 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 IL17RCQ8NAC3 791 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 FAM131CQ96AQ9 280 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 PHF21BQ96EK2 531 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 ERVK-6Q9BXR3 956 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 ZCCHC2Q9C0B9 1178 aaKnown RBP11.89□□□□□ -0.51
CCBE1-203ENST00000589116 IRF2BPLQ9H1B7 796 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 CYP4F12Q9HCS2 524 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 DNAJC28Q9NX36 388 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 NUDT4Q9NZJ9 180 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 SCML1Q9UN30 329 aa11.89□□□□□ -0.51
CCBE1-203ENST00000589116 UBXN8O00124 270 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 CDC7O00311 574 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 PLK4O00444 970 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 MMP20O60882 483 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 GFAPP14136 432 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 HOXB2P14652 356 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 RPL14P50914 215 aaKnown RBP11.88□□□□□ -0.51
CCBE1-203ENST00000589116 AQP5P55064 265 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 RPS14P62263 151 aaKnown RBP11.88□□□□□ -0.51
CCBE1-203ENST00000589116 GBX1Q14549 363 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 AGERQ15109 404 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 LACTB2Q53H82 288 aaPredicted RBP11.88□□□□□ -0.51
CCBE1-203ENST00000589116 C2orf27AQ580R0 203 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 PLEKHS1Q5SXH7 462 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 ATG14Q6ZNE5 492 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 GPSM1Q86YR5 675 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 LSMEM2Q8N112 164 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 FBXO39Q8N4B4 442 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 FITM2Q8N6M3 262 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 ZNF781Q8N8C0 355 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 PTGR2Q8N8N7 351 aaPredicted RBP11.88□□□□□ -0.51
CCBE1-203ENST00000589116 EXT2Q93063 718 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 PNPOQ9NVS9 261 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 VTI1BQ9UEU0 232 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 IKZF3Q9UKT9 509 aa11.88□□□□□ -0.51
CCBE1-203ENST00000589116 KLF8O95600 359 aaPredicted RBP11.87□□□□□ -0.51
CCBE1-203ENST00000589116 SOD1P00441 154 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 CHRNGP07510 517 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 ITGB6P18564 788 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 MPSTP25325 297 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 AOAHP28039 575 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 PRLHRP49683 370 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 ALDH18A1P54886 795 aaKnown RBP11.87□□□□□ -0.51
CCBE1-203ENST00000589116 ZBTB16Q05516 673 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 PFKFB4Q16877 469 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 ACSBG2Q5FVE4 666 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 FRA10AC1Q70Z53 315 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 BMP8AQ7Z5Y6 402 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 HDDC3Q8N4P3 179 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 AFAP1L2Q8N4X5 818 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 EDAQ92838 391 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 SKA1Q96BD8 255 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 FAR2Q96K12 515 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 FAM126AQ9BYI3 521 aaPredicted RBP11.87□□□□□ -0.51
CCBE1-203ENST00000589116 GSTO2Q9H4Y5 243 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 SLC2A4RGQ9NR83 387 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 COQ6Q9Y2Z9 468 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 F5P12259 2224 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 M0R296 226 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 MATN2O00339 956 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 ZNF195O14628 629 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 RAD51BO15315 384 aa11.87□□□□□ -0.51
CCBE1-203ENST00000589116 HDAC3O15379 428 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms