RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 AP2A2O94973 939 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 STX2P32856 288 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 NFE2L1Q14494 772 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 INSCQ1MX18 579 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 DEFB133Q30KQ1 61 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 UAP1L1Q3KQV9 507 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF658BQ4V348 819 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 RNF187Q5TA31 235 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF449Q6P9G9 518 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 SLC30A9Q6PML9 568 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 FAM83HQ6ZRV2 1179 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 KIAA0408Q6ZU52 694 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 TRMT10CQ7L0Y3 403 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 TAF8Q7Z7C8 310 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 SFTPA2Q8IWL1 248 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 KIAA2013Q8IYS2 634 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF514Q96K75 400 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 LINC00615Q96LM1 132 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 TIMM29Q9BSF4 260 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 CCM2Q9BSQ5 444 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 FUT8Q9BYC5 575 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 SPATS2LQ9NUQ6 558 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 ZFATQ9P243 1243 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 FAM8A1Q9UBU6 413 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 GNPTGQ9UJJ9 305 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 BTBD3Q9Y2F9 522 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 DNAJC16Q9Y2G8 782 aa10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 DNMT3AQ9Y6K1 912 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-213ENST00000587988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 MGAT4DA6NG13 374 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PRR19A6NJB7 356 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 LMO7DNF2Z398 122 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PFDN6O15212 129 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 YKT6O15498 198 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 FFAR2O15552 330 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 NIPSNAP2O75323 286 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 TRIM16O95361 564 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 EML2O95834 649 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 OR56A5P0C7T3 313 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ZNF883P0CG24 379 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 CD59P13987 128 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PKMP14618 531 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 MCM3P25205 808 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PHBP35232 272 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ACTR1BP42025 376 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PGGT1BP53609 377 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ADARP55265 1226 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ACTR1AP61163 376 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ARHGAP8P85298 464 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 TIAL1Q01085 375 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ILF3Q12906 894 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC29A2Q14542 456 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ELOCQ15369 112 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 UAP1Q16222 522 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 RBM20Q5T481 1227 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 STPG1Q5TH74 334 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PTRHD1Q6GMV3 140 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 DBX2Q6ZNG2 339 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 STRA8Q7Z7C7 330 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 GALNT7Q86SF2 657 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 AMZ2Q86W34 360 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC26A11Q86WA9 606 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 LRRC6Q86X45 466 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 CTAGE3PQ8IX95 158 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 CFAP206Q8IYR0 622 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 FSTL5Q8N475 847 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PPM1NQ8N819 430 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ACVR1CQ8NER5 493 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 OR2L2Q8NH16 312 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 GABPB2Q8TAK5 448 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 CDKL2Q92772 493 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 FAM136AQ96C01 138 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 MRRFQ96E11 262 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ATXN7L3BQ96GX2 97 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 NDNQ99608 321 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 MCMBPQ9BTE3 642 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 GSDMCQ9BYG8 508 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ACSS3Q9H6R3 686 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 PRDM8Q9NQV8 689 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 TAAR2Q9P1P5 351 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 VPS9D1Q9Y2B5 631 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 MED16Q9Y2X0 877 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 CSNK1G3Q9Y6M4 447 aa10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 EP300Q09472 2414 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-213ENST00000587988 ARHGEF17Q96PE2 2063 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 LAMA1P25391 3075 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 A0A087WUV0 522 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 C17orf113A0A1B0GUU1 675 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 QSOX1O00391 747 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 TRIM38O00635 465 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CTIFO43310 598 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 FOXD2O60548 495 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 SNX2O60749 519 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 ESR1P03372 595 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 ANXA6P08133 673 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 ABHD2P08910 425 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 MYF5P13349 255 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms