RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 GRID2O43424 1007 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 TSPAN8P19075 237 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 HK3P52790 923 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 NCALDP61601 193 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 KHDC1Q4VXA5 237 aaKnown RBP19.55■□□□□ 0.72
TRIM47-204ENST00000587339 SLC9B1Q4ZJI4 515 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 C2orf27AQ580R0 203 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 SBSNQ6UWP8 590 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 AFAP1L2Q8N4X5 818 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 CXorf40AQ8TE69 158 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 FAM126AQ9BYI3 521 aaPredicted RBP19.55■□□□□ 0.72
TRIM47-204ENST00000587339 NUF2Q9BZD4 464 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 ARMCX1Q9P291 453 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 LRRC14BA6NHZ5 514 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 UBFD1O14562 309 aaKnown RBP19.55■□□□□ 0.72
TRIM47-204ENST00000587339 MID1O15344 667 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 AP2A2O94973 939 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 CBX6O95503 412 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 DRD3P35462 400 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 PIP5KL1Q5T9C9 394 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 ZNF765Q7L2R6 523 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 PHYKPLQ8IUZ5 450 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 KIRREL3Q8IZU9 778 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 KCNK12Q9HB15 430 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 TRPV5Q9NQA5 729 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 NUDT4Q9NZJ9 180 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 FADS3Q9Y5Q0 445 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 QSOX1O00391 747 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 INPP4BO15327 924 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 ADH1BP00325 375 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 T-ENOLP0DO92 83 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 ENO3P13929 434 aaPredicted RBP19.54■□□□□ 0.72
TRIM47-204ENST00000587339 AOAHP28039 575 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 CREB5Q02930 508 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 HSPA14Q0VDF9 509 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 PDCD2Q16342 344 aaPredicted RBP19.54■□□□□ 0.72
TRIM47-204ENST00000587339 FBXO48Q5FWF7 155 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 ZNF648Q5T619 568 aaPredicted RBP19.54■□□□□ 0.72
TRIM47-204ENST00000587339 FAM91A1Q658Y4 838 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 ANKS6Q68DC2 871 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 SDE2Q6IQ49 451 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 RALGPS2Q86X27 583 aaPredicted RBP19.54■□□□□ 0.72
TRIM47-204ENST00000587339 AADATQ8N5Z0 425 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 FAR2Q96K12 515 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 PPP1R36Q96LQ0 422 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 TCF7L2Q9NQB0 619 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 HEBP1Q9NRV9 189 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 SORCS3Q9UPU3 1222 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 FIS1Q9Y3D6 152 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 PIAS3Q9Y6X2 628 aa19.54■□□□□ 0.72
TRIM47-204ENST00000587339 OR2AG2A6NM03 316 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 EIF3FO00303 357 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 KPNA5O15131 536 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 RAD51BO15315 384 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 DNAJC8O75937 253 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 FTH1P02794 183 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 C5AR1P21730 350 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 NTSR1P30989 418 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 NAA20P61599 178 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 PON2Q15165 354 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 PPP1R3AQ16821 1122 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 KLHL29Q96CT2 875 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 NSUN5Q96P11 429 aaKnown RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 TUBB6Q9BUF5 446 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 C1QTNF3Q9BXJ4 246 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 WDR55Q9H6Y2 383 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 TNFRSF12AQ9NP84 129 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 LIMD1Q9UGP4 676 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 OARD1Q9Y530 152 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 CAPN7Q9Y6W3 813 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 PIKFYVEQ9Y2I7 2098 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 TRPC5OSA6NMA1 111 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 FFAR2O15552 330 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 RPS17P08708 135 aaKnown RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 EPHA3P29320 983 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 AGTR2P50052 363 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 CLCQ05315 142 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 DPTQ07507 201 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 TMEM115Q12893 351 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 BOP1Q14137 746 aaKnown RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 KRT72Q14CN4 511 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 RAET1GQ6H3X3 334 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-204ENST00000587339 CYHR1Q6ZMK1 362 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 SLC44A3Q8N4M1 653 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 ADAMTS6Q9UKP5 1117 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 TRAF6Q9Y4K3 522 aa19.53■□□□□ 0.72
TRIM47-204ENST00000587339 GOLGA8QA0A0J9YX86 632 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 GOLGA8OA6NCC3 632 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 GOLGA8NF8WBI6 632 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 H0YHG0 523 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 K7ESM1 405 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 SGTAO43765 313 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 SOD1P00441 154 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 EGFP01133 1207 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 S100BP04271 92 aaPredicted RBP19.52■□□□□ 0.72
TRIM47-204ENST00000587339 JUNP05412 331 aaKnown RBP19.52■□□□□ 0.72
TRIM47-204ENST00000587339 GPR1P46091 355 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 RASSF2P50749 326 aa19.52■□□□□ 0.72
TRIM47-204ENST00000587339 SH3BP2P78314 561 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms